ggKbase home page

ar11r2_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_43_1
Delftia sp. KV29, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..475)
DNA (474bp) protein (158aa)
Transposase n=2 Tax=Bacteria RepID=A6N8V5_9BACT
Transposase {ECO:0000313|EMBL:AFJ11754.1}; TaxID=1170710 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. KV29.;"
transposase
ar11r2_scaffold_43_2
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

686..1525
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K2U8_AZOSB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAL93153.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
ar11r2_scaffold_43_3
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1565..2107
DNA (543bp) protein (181aa)
Flavodoxin n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G6L9_9GAMM
flavodoxin
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
ar11r2_scaffold_43_4
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2382..2846)
DNA (465bp) protein (155aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
CRISPR-associated protein Csn1 n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036086AD
tRNA-specific adenosine deaminase
ar11r2_scaffold_43_5
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(2872..3861)
DNA (990bp) protein (330aa)
integrase n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B583DC rbh
integrase rbh
Tax=CG_Proteo_01
ar11r2_scaffold_43_6
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4021..4341
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI0003776377
Uncharacterized protein {ECO:0000313|EMBL:EIG25811.1}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
ar11r2_scaffold_43_7
Helicobacter cetorum, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

4346..5059
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000362E795 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFI03669.1}; TaxID=182217 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter cetorum (strain ATCC BAA-429 / MIT 00-7128).;"
ar11r2_scaffold_43_8
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5096..5560
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. AU12-08 RepID=S9TKN4_9RALS
Uncharacterized protein {ECO:0000313|EMBL:AKC86824.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
acetyltransferase
ar11r2_scaffold_43_9
Marinomonas posidonica, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5631..6080
DNA (450bp) protein (150aa)
Transcription activator effector binding protein n=1 Tax=Marinomonas posidonica (strain CECT 7376 / NCIMB 14433 / IVIA-Po-181) RepID=F6CUD2_MARPP
transcription activator effector binding protein
Transcription activator effector binding protein {ECO:0000313|EMBL:AEF55251.1}; TaxID=491952 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas posidonica (strain CECT 7376 / NCIMB 14433 / IVIA-Po-181).;"
ar11r2_scaffold_43_10
unknown

Not on your lists

comp(6178..6714)
DNA (537bp) protein (179aa)

This feature has no annotations

ar11r2_scaffold_43_11
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6786..7496)
DNA (711bp) protein (237aa)
Probable ADP-ribosyl-[dinitrogen reductase] hydrolase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K2U2_AZOSB
ADP-ribosyl-(dinitrogen reductase) hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
ar11r2_scaffold_43_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7614..8240)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JYV5_9GAMM
NifQ family protein
NifQ family protein {ECO:0000313|EMBL:BAP57422.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar11r2_scaffold_43_13
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8259..8618)
DNA (360bp) protein (120aa)
Ferredoxin n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47G33_DECAR
ferredoxin
Tax=BJP_08E140C01_Dechloromonas_61_78
ar11r2_scaffold_43_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8664..8951)
DNA (288bp) protein (96aa)
Probable ferredoxin IV n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K2T9_AZOSB
ferredoxin IV
Ferredoxin IV {ECO:0000313|EMBL:BAP57424.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar11r2_scaffold_43_15
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8971..10260)
DNA (1290bp) protein (430aa)
Probable type A flavoprotein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K2T8_AZOSB rbh
fprA; type A flavoprotein rbh
Probable type A flavoprotein {ECO:0000313|EMBL:CAL93143.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
ar11r2_scaffold_43_16
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10263..10691)
DNA (429bp) protein (143aa)
Uncharacterized 15.7 kDa protein in draG 3'region n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JB75_HYPSM
hypothetical protein
Uncharacterized 15.7 kDa protein in draG 3'region {ECO:0000313|EMBL:CCB66850.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
ar11r2_scaffold_43_17
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10688..10972)
DNA (285bp) protein (95aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPD4_SIDLE
4Fe-4S ferredoxin iron-sulfur binding domain protein
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ADE11075.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
ar11r2_scaffold_43_18
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10986..12503)
DNA (1518bp) protein (506aa)
FeMo cofactor biosynthesis protein NifB n=1 Tax=Methylovulum miyakonense RepID=UPI00037E35CE rbh
Nitrogen fixation protein NifB {ECO:0000313|EMBL:KJV05190.1}; TaxID=1632867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn10-6.;"
nitrogenase cofactor biosynthesis protein NifB rbh
ar11r2_scaffold_43_19
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12730..13728
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Pseudomonas agarici RepID=UPI0002F4AF62 rbh
ATPase central domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
ar11r2_scaffold_43_20
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13748..16255
DNA (2508bp) protein (836aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8N8C6_PSEAI rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
ar11r2_scaffold_43_21
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16632..17975
DNA (1344bp) protein (448aa)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2SZ91_BURPP rbh
reverse transcriptase family protein
Reverse transcriptase family protein {ECO:0000313|EMBL:AJZ58628.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
ar11r2_scaffold_43_22
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17995..18420)
DNA (426bp) protein (142aa)
hemerythrin n=1 Tax=Teredinibacter turnerae RepID=UPI0003703BF2
hemerythrin metal-binding domain-containing protein
Hemerythrin metal-binding domain protein {ECO:0000313|EMBL:ACR12223.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" source="Teredinibacter turnerae (strain ATCC 39867 / T7901).;"
ar11r2_scaffold_43_23
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18420..19976)
DNA (1557bp) protein (519aa)
Nif-specific regulatory protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GVS6_9GAMM rbh
Nif-specific regulatory protein rbh
Nif-specific regulatory protein {ECO:0000313|EMBL:AGA90071.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
ar11r2_scaffold_43_24
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19973..21541)
DNA (1569bp) protein (523aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G643_9GAMM rbh
PAS/PAC sensor signal transduction histidine kinase rbh
ar11r2_scaffold_43_25
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22481..23062
DNA (582bp) protein (194aa)
Electron transport complex protein RnfA n=2 Tax=Azoarcus sp. (strain BH72) RepID=RNFA_AZOSB
rnfA1; electron transport complex protein RnfA
Tax=GWA2_Gallionellales_59_43_curated
ar11r2_scaffold_43_26
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23076..23624
DNA (549bp) protein (183aa)
Electron transport complex, RnfABCDGE type, B subunit n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) PF6_SIDLE">RepID=D5CPF6_SIDLE
Electron transport complex subunit B {ECO:0000256|HAMAP-Rule:MF_00463}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
electron transport complex, RnfABCDGE type, B subunit
ar11r2_scaffold_43_27
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23641..25137
DNA (1497bp) protein (499aa)
Electron transport complex protein RnfC n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) PF7_SIDLE">RepID=D5CPF7_SIDLE rbh
electron transport complex, RnfABCDGE type, C subunit rbh
Tax=BJP_IG2103_Rhodocyclales_63_50
ar11r2_scaffold_43_28
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25134..26210
DNA (1077bp) protein (359aa)
Electron transport complex protein RnfD n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FY7_DECAR rbh
electron transport complex, RnfABCDGE type, D subunit rbh
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
ar11r2_scaffold_43_29
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26210..26845
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00036E6B7C
electron transport complex, RnfABCDGE type, G subunit
Tax=GWA2_Gallionellales_60_142_curated
ar11r2_scaffold_43_30
RIFOXYD2_FULL_Sideroxydans_59_7_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26842..27519
DNA (678bp) protein (226aa)
Electron transport complex protein RnfE n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPG0_SIDLE rbh
electron transport complex, RnfABCDGE type, E subunit rbh
Tax=RIFOXYD2_FULL_Sideroxydans_59_7_curated
Displaying items 1-30 of 93 in total

View Taxonomy