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ar11r2_scaffold_548

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_548_1
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..530
DNA (528bp) protein (176aa)
Integrase catalytic region n=3 Tax=Acidithiobacillus RepID=B5ERY7_ACIF5
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ACH83658.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
ar11r2_scaffold_548_2
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

734..2644
DNA (1911bp) protein (637aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Microbulbifer variabilis RepID=UPI00036B78F5 rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
ar11r2_scaffold_548_3
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2647..3312
DNA (666bp) protein (222aa)
16S rRNA methyltransferase n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B7400C
gidB; 16S rRNA methyltransferase GidB
Tax=BJP_IG2103_Dechloromonas_63_51
ar11r2_scaffold_548_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3309..4088
DNA (780bp) protein (260aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX25_HALNC rbh
cobyrinic acid ac-diamide synthase rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ACX97145.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar11r2_scaffold_548_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4085..4957
DNA (873bp) protein (291aa)
ParB-like partition protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWW6_9GAMM
ParB-like partition protein {ECO:0000313|EMBL:EIJ35859.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ParB-like partition protein
ar11r2_scaffold_548_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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5205..6446
DNA (1242bp) protein (414aa)
Type II secretion system F domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L137_HALNC rbh
type II secretion system F domain-containing protein rbh
Type II secretion system F domain protein {ECO:0000313|EMBL:ACX96410.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar11r2_scaffold_548_7
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6452..7339
DNA (888bp) protein (296aa)
pilD; type IV pilus prepilin peptidase PilD (EC:3.4.23.43 3.4.99.-) rbh
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00035CFA6E rbh
ar11r2_scaffold_548_8
unknown

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7339..7476
DNA (138bp) protein (46aa)

This feature has no annotations

ar11r2_scaffold_548_9
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

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7446..8090
DNA (645bp) protein (215aa)
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
Dephospho-CoA kinase n=1 Tax=Edwardsiella tarda C07-087 RepID=M4THM3_EDWTA
ar11r2_scaffold_548_10
unknown

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comp(8191..8664)
DNA (474bp) protein (158aa)

This feature has no annotations

ar11r2_scaffold_548_11
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8713..9318
DNA (606bp) protein (202aa)
Response regulator NasT n=1 Tax=Limnobacter sp. MED105 RepID=A6GRA9_9BURK
Response regulator NasT {ECO:0000313|EMBL:EDM83382.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
response regulator NasT
ar11r2_scaffold_548_12
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9560..10834
DNA (1275bp) protein (425aa)
nitrate transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI0003724144 rbh
Nitrate transport protein NrtA {ECO:0000313|EMBL:GAO32539.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
nitrate transporter periplasmic component rbh
ar11r2_scaffold_548_13
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11123..11923
DNA (801bp) protein (267aa)
nitrate ABC transporter permease n=1 Tax=Methylotenera mobilis RepID=UPI000365DA16 rbh
Nitrate ABC transporter permease {ECO:0000313|EMBL:GAO35284.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
nitrate ABC transporter inner membrane subunit rbh
ar11r2_scaffold_548_14
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11940..12731
DNA (792bp) protein (264aa)
Nitrate ABC transporter, ATPase subunits C and D n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X8Y1_METSD rbh
nitrate ABC transporter ATPases C and D rbh
Tax=BJP_S1_SUB10_Methylophilales_55_32
ar11r2_scaffold_548_15
Serratia plymuthica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12741..16547
DNA (3807bp) protein (1269aa)
Nitrite reductase [NAD(P)H] large subunit NasB {ECO:0000313|EMBL:AGO55706.1}; EC=1.7.1.4 {ECO:0000313|EMBL:AGO55706.1};; TaxID=682634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia plymuthica 4Rx13.;"
nasB; nitrite reductase [NAD(p)H] large subunit NasB (EC:1.7.1.4) rbh
Nitrite reductase [NAD(P)H] large subunit NasB n=1 Tax=Serratia plymuthica 4Rx13 RepID=S0AFV4_SERPL rbh
ar11r2_scaffold_548_16
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16762..17463
DNA (702bp) protein (234aa)
Glutamine amidotransferase class-I n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0E2G3_THIND
yfeJ_[H]; glutamine amidotransferase class-I
Glutamine amidotransferase class-I {ECO:0000313|EMBL:AGA34841.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
ar11r2_scaffold_548_17
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17460..17801
DNA (342bp) protein (114aa)
Nitrite reductase [NAD(P)H] small subunit {ECO:0000313|EMBL:ESS59760.1}; EC=1.7.1.4 {ECO:0000313|EMBL:ESS59760.1};; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae S611.;"
nitrite reductase (NAD(P)H) large subunit (EC:1.7.1.4 1.18.1.3)
Nitrite reductase [NAD(P)H] small subunit n=1 Tax=Enterobacter cloacae S611 RepID=V5AGM3_ENTCL
ar11r2_scaffold_548_18
unknown

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comp(17823..18032)
DNA (210bp) protein (70aa)

This feature has no annotations

ar11r2_scaffold_548_19
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18192..18707
DNA (516bp) protein (172aa)
Transposase ISRme5 (Copy a, CMGI-2) n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LNZ0_RALME
tnpA; transposase ISRme5 (copy c)
Transposase ISRme5 (Copy c) {ECO:0000313|EMBL:ABF08186.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
Displaying 19 items

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