ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

ar11r2_scaffold_395_9

Organism: ALUMROCK_MS11_Gammaproteobacteria_58_89_curated

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(8773..9726)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 309.0
  • Bit_score: 431
  • Evalue 9.90e-118
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Pseudomonas mendocina RepID=UPI00036AD6E2 similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 309.0
  • Bit_score: 431
  • Evalue 4.10e-118
  • rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 309.0
  • Bit_score: 431
  • Evalue 2.00e-118
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGAATACTTACCCCTTGATTCAACTGGCGAATCCGCGCGGCTTTTGCGCCGGGGTGGATCGAGCCATCGAGATTGTCGAGCGCGCGCTGGAGCTGTTTGGTGCGCCGATTTATGTGCGCCATGAGATCGTGCATAACCGCTATATCGTCGACGACCTGAAAGCCAAGGGCGCGGTTTTTATCGAAGAACTCGCCGATGTGCCGGATGGTGCCACGCTGATTTTCAGCGCGCACGGTGTGTCCAAGGCGATTGAAGATGCCGCAGCGGCGCGCGGTTTGCGTATTTTTGACGCCACTTGCCCGTTGGTGACCAAGGTGCATTTGGAAGTGGCGCGTCACGCCAAACAACGCCGCGAGGTGGTGCTGATCGGCCATGCGGGACACCCTGAAGTCGAAGGCACGATGGGGCATTACGACGCGAGCCTGGGCGGGCGCATCCATCTGGTCGAATCGGTGGGTGATGTGGCGAGTCTTGCGGTATCCGACCCCGAGAACCTAGCCTTTTCCACCCAGACCACTCTGTCTTTGGACGAAACCCAGGCGATTGTTGAGGCTCTGCGCGTACGTTTTCCGGCGATTGCCAGCCCGCGCAAGGATGATATTTGCTATGCCACCCAAAATCGCCAGGATGCCGTCAAGCAGTTGATGCAGGATTGCGATTTGTTGCTGGTGGTGGGAAGCAAAAGCAGCTCCAACTCCAACCGCCTGCGCGAAATTGGCGAGCGCATGGGCGTGGCTAGCTTTTTGATTGATGGCGCAGAGGATATTCGCGCCGAGTGGCTGGTCGGTAAACAGCGCATTGGTCTGACAGCGGGCGCGTCGGCACCCGAGGTGTTGGTGCAAGCGGTGATTGCTTATTTACGCGCTTGTTGCGATGCGCAGGTGTTGTGCGAGGATGAGTCGGCGCGTGAGTCGGTGGTTTTTCCGATGCCAAGGGAATTGCGGAGGGAGTAA
PROTEIN sequence
Length: 318
MNTYPLIQLANPRGFCAGVDRAIEIVERALELFGAPIYVRHEIVHNRYIVDDLKAKGAVFIEELADVPDGATLIFSAHGVSKAIEDAAAARGLRIFDATCPLVTKVHLEVARHAKQRREVVLIGHAGHPEVEGTMGHYDASLGGRIHLVESVGDVASLAVSDPENLAFSTQTTLSLDETQAIVEALRVRFPAIASPRKDDICYATQNRQDAVKQLMQDCDLLLVVGSKSSSNSNRLREIGERMGVASFLIDGAEDIRAEWLVGKQRIGLTAGASAPEVLVQAVIAYLRACCDAQVLCEDESARESVVFPMPRELRRE*