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ar11r2_scaffold_395

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_395_1
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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255..1412
DNA (1158bp) protein (386aa)
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Acetylornithine deacetylase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLR7_THISH rbh
acetylornithine deacetylase rbh
ar11r2_scaffold_395_2
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1673..2830
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003794B4A rbh
Uncharacterized protein {ECO:0000313|EMBL:ERP96018.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
hypothetical protein
ar11r2_scaffold_395_3
Yersinia rohdei, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2898..3161
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Oceanimonas smirnovii RepID=UPI0003711C77
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AJJ11625.1}; TaxID=29485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia rohdei.;"
ar11r2_scaffold_395_4
Yersinia intermedia, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3165..4232
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Oceanimonas smirnovii RepID=UPI0003734151 rbh
efflux transporter, RND family, MFP subunit
HlyD family secretion protein {ECO:0000313|EMBL:EEQ17453.1}; TaxID=349965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia intermedia ATCC 29909.;"
ar11r2_scaffold_395_5
Yersinia aldovae, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4210..6138
DNA (1929bp) protein (643aa)
hypothetical protein n=1 Tax=Oceanimonas smirnovii RepID=UPI000371C5D9 rbh
fusaric acid resistance family protein
Fusaric acid resistance family protein {ECO:0000313|EMBL:AJJ62403.1}; TaxID=1453495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia aldovae 670-83.;"
ar11r2_scaffold_395_6
Serratia fonticola, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6135..7682
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Oceanimonas smirnovii RepID=UPI0003796B74 rbh
Protein CyaE {ECO:0000256|PIRNR:PIRNR001892}; TaxID=1332071 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia fonticola AU-AP2C.;"
outer membrane efflux family protein
ar11r2_scaffold_395_7
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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7834..8298
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Oceanimonas smirnovii RepID=UPI000379A123
Mg2+/Co2+ transporter {ECO:0000313|EMBL:EIC20769.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
Ion transport 2 domain-containing protein
ar11r2_scaffold_395_8
unknown

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comp(8505..8696)
DNA (192bp) protein (64aa)

This feature has no annotations

ar11r2_scaffold_395_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8773..9726)
DNA (954bp) protein (318aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Pseudomonas mendocina RepID=UPI00036AD6E2 rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase rbh
ar11r2_scaffold_395_10
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9728..10159)
DNA (432bp) protein (144aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KI41_9GAMM
FKBP-type peptidylprolyl isomerase
Tax=RBG_16_Gamma2_64_11_curated
ar11r2_scaffold_395_11
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10156..10641)
DNA (486bp) protein (162aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.;"
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036063CE
Lipoprotein signal peptidase
ar11r2_scaffold_395_12
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10638..13553)
DNA (2916bp) protein (972aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus sp. (strain P1).;"
isoleucyl-tRNA synthetase n=1 Tax=Cycloclasticus pugetii RepID=UPI000378C499 rbh
ileS; isoleucyl-tRNA synthetase rbh
ar11r2_scaffold_395_13
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13789..15495
DNA (1707bp) protein (569aa)
type II secretory protein GspE n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036C898E rbh
type IV-A pilus assembly ATPase PilB rbh
Type IV-A pilus assembly ATPase PilB {ECO:0000313|EMBL:ACL71879.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
ar11r2_scaffold_395_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15735..16259
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL17 RepID=UPI0003631093
PAS sensor protein
PAS sensor protein {ECO:0000313|EMBL:ACX96126.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar11r2_scaffold_395_15
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16446..16901
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624C6D
UPF0178 protein yaiI {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
YaiI/YqxD family protein
ar11r2_scaffold_395_16
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16898..18700
DNA (1803bp) protein (601aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G376_9GAMM rbh
ATP-dependent DNA helicase RecQ
Tax=RBG_16_Betaproteobacteria_58_11_curated
ar11r2_scaffold_395_17
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18814..19263)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B6E028
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR91201.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
ar11r2_scaffold_395_18
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19532..19828
DNA (297bp) protein (99aa)
BolA n=1 Tax=Thioalkalivibrio RepID=UPI000362358B
BolA family protein
BolA family protein {ECO:0000313|EMBL:ADC72727.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
ar11r2_scaffold_395_19
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19862..20134)
DNA (273bp) protein (91aa)
iron transporter n=1 Tax=Thioalkalivibrio RepID=UPI000380209D
Fe(II) trafficking protein YggX
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
ar11r2_scaffold_395_20
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20091..21182)
DNA (1092bp) protein (364aa)
A/G-specific DNA-adenine glycosylase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G516_9GAMM rbh
adenine glycosylase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar11r2_scaffold_395_21
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21490..21717
DNA (228bp) protein (76aa)
molybdopterin converting factor n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037096FF
molybdopterin converting factor subunit 1
Tax=RBG_16_Gamma2_60_9_curated
ar11r2_scaffold_395_22
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21977..22285
DNA (309bp) protein (103aa)
Glycoside hydrolase family 13 domain protein n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BXI8_DESAD
glycoside hydrolase family 13
Glycoside hydrolase family 13 domain protein {ECO:0000313|EMBL:ACS80494.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 /; VKM B-1763).;"
ar11r2_scaffold_395_23

Not on your lists

22301..23221
DNA (921bp) protein (307aa)
Putative Aldose 1-epimerase {ECO:0000313|EMBL:CBI10511.1}; EC=5.1.3.3 {ECO:0000313|EMBL:CBI10511.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative Aldose 1-epimerase n=1 Tax=mine drainage metagenome RepID=E6QTD9_9ZZZZ
aldose 1-epimerase
ar11r2_scaffold_395_24
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23481..23606)
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=2 Tax=Thioalkalimicrobium RepID=F6DCY8_THICA
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
ar11r2_scaffold_395_25
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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23801..24334
DNA (534bp) protein (178aa)
Integrase catalytic region n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E911_9GAMM
Integrase catalytic region {ECO:0000313|EMBL:EGZ40656.1}; TaxID=765914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
putative transposase protein
Displaying 25 items

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