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ar11r2_scaffold_2485

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_2485_1
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(618..1142)
DNA (525bp) protein (175aa)
RNA polymerase sigma factor, sigma-70 family protein id=3737525 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
ar11r2_scaffold_2485_2
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1385..2524
DNA (1140bp) protein (380aa)
ial:IALB_0310 dxr; 1-Deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] id=717977 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
dxr; 1-Deoxy-D-xylulose 5-phosphate reductoisomerase rbh
ar11r2_scaffold_2485_3
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2693..3067
DNA (375bp) protein (125aa)
S23 ribosomal protein id=3771497 bin=GWF2_Ignavibacteria_35_20 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
intervening sequence, 23S rRNA
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
ar11r2_scaffold_2485_4
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3190..4545
DNA (1356bp) protein (452aa)
ial:IALB_0309 rseP; Sigma E protease regulator; K11749 regulator of sigma E protease [EC:3.4.24.-] id=717975 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
rseP; Sigma E protease regulator rbh
ar11r2_scaffold_2485_5
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4542..4838
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI00035DBA8A
nucleotidyltransferase
Tax=RBG_16_Ignavibacteria_36_9_curated
ar11r2_scaffold_2485_6
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

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4835..5200
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00036CDBD3
hypothetical protein
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
ar11r2_scaffold_2485_7
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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5353..5727
DNA (375bp) protein (125aa)
ial:IALB_0308 lytS; LytT sensor histidine kinase id=717974 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
lytS; LytT sensor histidine kinase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
Displaying 7 items

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