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ar4r2_scaffold_7911

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_7911_1

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comp(137..1828)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YQI6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD39432.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Restriction endonuclease S subunit
ar4r2_scaffold_7911_2
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1821..2855)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q30YF2_DESDG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB39294.1}; TaxID=207559 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
ar4r2_scaffold_7911_3
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(2852..3592)
DNA (741bp) protein (247aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UJZ2_9CHRO
type I restriction-modification system methyltransferase subunit
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:AFY95140.1}; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" so
ar4r2_scaffold_7911_4
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(3670..4221)
DNA (552bp) protein (184aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L9A6_9CYAN
type I restriction-modification system methyltransferase subunit
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:AFY95140.1}; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" so
ar4r2_scaffold_7911_5
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4237..6618)
DNA (2382bp) protein (794aa)
type I restriction-modification system, R subunit (EC:3.1.21.3)
Type I restriction-modification system, R subunit {ECO:0000313|EMBL:ACE83739.1}; EC=3.1.21.3 {ECO:0000313|EMBL:ACE83739.1};; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudo
Helicase, type I site-specific restriction-modification system restriction subunit n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LHY1_9CYAN rbh
ar4r2_scaffold_7911_6
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6865..7368)
DNA (504bp) protein (168aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsi
Pseudouridine synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GA0_THICR
pseudouridine synthase
ar4r2_scaffold_7911_7
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7404..7832)
DNA (429bp) protein (143aa)
pseudouridine synthase (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae;
Pseudouridine synthase n=2 Tax=Nitrosococcus oceani RepID=Q3JC97_NITOC
ar4r2_scaffold_7911_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7846..8412)
DNA (567bp) protein (189aa)
translation factor Sua5 n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000361416F
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Sua5/YciO/YrdC/YwlC family protein
ar4r2_scaffold_7911_9

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8720..8977
DNA (258bp) protein (86aa)
Bacterioferritin comigratory protein n=1 Tax=mine drainage metagenome RepID=T1A026_9ZZZZ
Bacterioferritin comigratory protein {ECO:0000313|EMBL:EQD35145.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
peroxiredoxin
ar4r2_scaffold_7911_10
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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9015..10463
DNA (1449bp) protein (483aa)
phosphate starvation protein PhoH n=1 Tax=Thiomicrospira halophila RepID=UPI00036123B4
Phosphate starvation protein PhoH {ECO:0000313|EMBL:KDN96920.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydr
phosphate starvation protein PhoH
ar4r2_scaffold_7911_11
unknown

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10535..11137
DNA (603bp) protein (201aa)

This feature has no annotations

ar4r2_scaffold_7911_12
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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11187..11465
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KDN94810.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibri
ar4r2_scaffold_7911_13
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

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11438..11860
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BR28_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN68454.1}; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
ar4r2_scaffold_7911_14
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

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11886..12593
DNA (708bp) protein (236aa)
isocitrate dehydrogenase (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XR69_SORCE
ar4r2_scaffold_7911_15
Rheinheimera sp. A13L, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12601..14034
DNA (1434bp) protein (478aa)
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase, NADP-dependent, monomeric type n=1 Tax=Rheinheimera sp. A13L RepID=F7NXH7_9GAMM
Isocitrate dehydrogenase, NADP-dependent, monomeric type {ECO:0000313|EMBL:EGM77219.1}; TaxID=506534 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;
ar4r2_scaffold_7911_16
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14170..14646
DNA (477bp) protein (159aa)
Heat shock protein DnaJ domain protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7J8_9GAMM
molecular chaperone DnaJ
Molecular chaperone DnaJ {ECO:0000313|EMBL:AHF00950.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalka
ar4r2_scaffold_7911_17
Vibrio vulnificus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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14759..15067
DNA (309bp) protein (103aa)
ATP-dependent Clp protease adapter protein ClpS n=4 Tax=Vibrio vulnificus RepID=CLPS_VIBVU
clpS; ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000255|HAMAP-Rule:MF_00302}; TaxID=216895 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vib
ar4r2_scaffold_7911_18
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15086..17239
DNA (2154bp) protein (718aa)
ATP-dependent Clp protease ATP-binding protein ClpA n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EHC6_9BURK
clpA; Clp protease ClpX
Clp protease ClpX {ECO:0000313|EMBL:KIF81331.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA
ar4r2_scaffold_7911_19
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17249..17569)
DNA (321bp) protein (107aa)
nitrogen regulatory protein P-II n=1 Tax=Methylomonas sp. MK1 RepID=UPI00035F754F
nitrogen regulatory protein P-II
Putative nitrogen regulatory protein P-II {ECO:0000313|EMBL:AAU92976.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source
ar4r2_scaffold_7911_20
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17584..18765)
DNA (1182bp) protein (394aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZV03_METMM
CzcA family heavy metal efflux pump
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:AEF99436.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Meth
Displaying 20 items

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