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ar4r2_scaffold_1756

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1756_1
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..197)
DNA (195bp) protein (65aa)
membane protease HflC n=1 Tax=Methylobacter marinus RepID=UPI000371E501
Membane protease HflC {ECO:0000313|EMBL:AKH19848.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
HflC protein
ar4r2_scaffold_1756_2
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(197..1396)
DNA (1200bp) protein (400aa)
HflK protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBQ0_THICA rbh
HflK protein
HflK protein {ECO:0000313|EMBL:AEG31286.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium
ar4r2_scaffold_1756_3
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1447..2769)
DNA (1323bp) protein (441aa)
GTPase HflX n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GP1_THICR rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Pisciricke
small GTP-binding protein domain-containing protein
ar4r2_scaffold_1756_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2816..3076)
DNA (261bp) protein (87aa)
RNA chaperone Hfq n=1 Tax=Thiomicrospira arctica RepID=UPI00035E2171
host factor Hfq
host factor Hfq; K03666 host factor-I protein Tax=CG_Thiomicrospira_01
ar4r2_scaffold_1756_5
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3294..4220)
DNA (927bp) protein (309aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003774275
ar4r2_scaffold_1756_6
Bermanella marisrubri, Bermanella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4224..6053)
DNA (1830bp) protein (610aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI0003627167
DNA mismatch repair protein mutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=207949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Bermanella.;"
ar4r2_scaffold_1756_7
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6061..7509)
DNA (1449bp) protein (483aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AFJ02816.1}; EC=3.5.1.28 {ECO:0000313|EMBL:AFJ02816.1};; Flags: Precursor;; TaxID=754477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Th
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YIS3_METFJ
ar4r2_scaffold_1756_8
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7530..8009)
DNA (480bp) protein (160aa)
YjeE family ATPase n=1 Tax=Proteus mirabilis WGLW4 RepID=K1HI86_PROMI
ATP/GTP hydrolase
Hydrolase, P-loop family {ECO:0000313|EMBL:EEI47631.1}; TaxID=525369 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis
ar4r2_scaffold_1756_9
Gallaecimonas xiamenensis, Gallaecimonas, Gammaproteobacteria, Proteobacteria, Bacteria

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8187..9143
DNA (957bp) protein (319aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=745411 species
Epoxyqueuosine reductase n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JRQ0_9GAMM
[Fe-S]-binding protein
ar4r2_scaffold_1756_10
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9208..10161)
DNA (954bp) protein (318aa)
Response regulator receiver modulated CheW protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7X8_9GAMM rbh
Response regulator receiver protein {ECO:0000313|EMBL:KDN95205.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hy
response regulator receiver
ar4r2_scaffold_1756_11
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10286..10735)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003784F05
hypothetical protein Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
hypothetical protein
ar4r2_scaffold_1756_12
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10806..12164)
DNA (1359bp) protein (453aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GP9_THICR rbh
deoxyguanosinetriphosphate triphosphohydrolase-like protein
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae;
ar4r2_scaffold_1756_13
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12230..13492
DNA (1263bp) protein (421aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:000025
Proline--tRNA ligase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBY7_THICA
prolyl-tRNA synthetase
Displaying 13 items

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