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ar4r2_scaffold_8729

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_8729_1
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..2410
DNA (2409bp) protein (803aa)
Resistance-Nodulation-Cell Division (RND) superfamily transporter n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IH2_THICR
Transporter {ECO:0000313|EMBL:KDN96468.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
acriflavin resistance protein
ar4r2_scaffold_8729_2
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2523..2903
DNA (381bp) protein (127aa)
50S ribosomal protein L13 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8R9_9GAMM
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thi
ar4r2_scaffold_8729_3
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2917..3309
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RS9_THICR
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000255|HAMAP-Rule:MF_00532}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicro
ar4r2_scaffold_8729_4
Methylophaga aminisulfidivorans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3371..3829)
DNA (459bp) protein (153aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SZR5_9GAMM
ar4r2_scaffold_8729_5
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4782..5312
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CFY9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42532.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggi
hypothetical protein
ar4r2_scaffold_8729_6
unknown

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comp(5640..5813)
DNA (174bp) protein (58aa)

This feature has no annotations

ar4r2_scaffold_8729_7
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5963..7552)
DNA (1590bp) protein (530aa)
IMP cyclohydrolase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B61630 rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
ar4r2_scaffold_8729_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7631..7876)
DNA (246bp) protein (82aa)
Putative DNA-binding protein fis n=1 Tax=mine drainage metagenome RepID=E6PU18_9ZZZZ
Fis family transcriptional regulator; K03557 Fis family transcriptional regulator, factor for inversion stimulation protein Tax=CG_Thiomicrospira_01
Fis family transcriptional regulator
ar4r2_scaffold_8729_9
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7979..8332
DNA (354bp) protein (118aa)
ferredoxin n=1 Tax=Marinobacterium stanieri RepID=UPI00025598BD
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ABB41141.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (s
ar4r2_scaffold_8729_10
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8397..8666)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003616CE8
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000255|HAMAP-Rule:MF_00500}; TaxID=382245 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonic
ar4r2_scaffold_8729_11
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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8870..9619
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JA3_THICR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB40770.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" sou
ar4r2_scaffold_8729_12
unknown

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9624..10184
DNA (561bp) protein (187aa)

This feature has no annotations

ar4r2_scaffold_8729_13
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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10171..10485
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036A6444
PP-loop domain-containing protein
PP-loop domain protein {ECO:0000313|EMBL:AEG32347.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkali
Displaying 13 items

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