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ar4r2_scaffold_9712

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_9712_1
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..705)
DNA (705bp) protein (235aa)
DNA mismatch repair protein MutS n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=MUTS_THICR
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=CG_Thiomicrospira_01
DNA mismatch repair protein MutS
ar4r2_scaffold_9712_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(777..1385)
DNA (609bp) protein (203aa)
DNA mismatch repair protein MutS n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G6N1_9GAMM
DNA mismatch repair protein MutS
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=CG_Thiomicrospira_01
ar4r2_scaffold_9712_3
Pseudomonas sp. GM50, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1410..2522)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B5C980 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJM67015.1}; TaxID=1144332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G
hypothetical protein
ar4r2_scaffold_9712_4
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2653..3156
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000374F7F9
Damage-inducible protein CinA {ECO:0000313|EMBL:KDN96592.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogen
CinA-like protein
ar4r2_scaffold_9712_5
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3278..4144
DNA (867bp) protein (289aa)
Protein RecA n=1 Tax=Methylophaga lonarensis MPL RepID=M7PGC8_9GAMM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1286106 species="Bacteria; Proteoba
recombinase A
ar4r2_scaffold_9712_6
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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4192..4653
DNA (462bp) protein (154aa)
Putative Regulatory protein recX n=3 Tax=Vibrio nigripulchritudo RepID=U4ER06_9VIBR
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1238441 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" sou
recX family protein
ar4r2_scaffold_9712_7
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4653..6143
DNA (1491bp) protein (497aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBM5_9GAMM
alanyl-tRNA synthetase
ar4r2_scaffold_9712_8
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6166..7119
DNA (954bp) protein (318aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_
Alanine--tRNA ligase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=SYA_THICR
Suspect SCG annotation. See neighboring gene [ar4r2_scaffold_9712_7].
ar4r2_scaffold_9712_9
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7147..8013
DNA (867bp) protein (289aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
Aspartokinase n=2 Tax=cellular organisms RepID=M3SDB3_ENTHI
lysC; Aspartokinase
ar4r2_scaffold_9712_10
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7952..8293
DNA (342bp) protein (114aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=477228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JG61_PSEST
ar4r2_scaffold_9712_trna_1
unknown

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8393..8479
DNA (87bp)
transferRNA
Displaying 11 items

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