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ar4r2_scaffold_3905

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_3905_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..2538
DNA (2538bp) protein (846aa)
Lytic transglycosylase catalytic n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV04_9GAMM rbh
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EIJ35197.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" sour
lytic murein transglycosylase
ar4r2_scaffold_3905_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2538..3548
DNA (1011bp) protein (337aa)
Type II secretion system protein L n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV02_9GAMM
General secretion pathway protein L {ECO:0000313|EMBL:EIJ35195.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix ni
general secretion pathway protein GspL
ar4r2_scaffold_3905_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3545..4705
DNA (1161bp) protein (387aa)
Type II secretion system protein N (GspN) n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV00_9GAMM
Type II secretion system protein N (GspN) {ECO:0000313|EMBL:EIJ35193.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothri
general secretion pathway protein N
ar4r2_scaffold_3905_4
unknown

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comp(4875..5057)
DNA (183bp) protein (61aa)

This feature has no annotations

ar4r2_scaffold_3905_5
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5230..5997)
DNA (768bp) protein (256aa)
L-lysine 2,3-aminomutase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1J6_9GAMM
L-lysine 2,3-aminomutase {ECO:0000313|EMBL:EHQ51683.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothi
lysine 2,3-aminomutase
ar4r2_scaffold_3905_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6762..7148)
DNA (387bp) protein (129aa)
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:EIJ36134.1}; EC=1.3.5.1 {ECO:0000313|EMBL:EIJ36134.1};; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thio
Succinate dehydrogenase subunit D n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXP1_9GAMM
succinate dehydrogenase
ar4r2_scaffold_3905_7

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comp(7209..8042)
DNA (834bp) protein (278aa)
Putative spermidine synthase n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YZ46_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KKN54857.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical spermidine synthase
ar4r2_scaffold_3905_8
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8046..8888)
DNA (843bp) protein (281aa)
Serine/threonine-protein kinase pkn1 {ECO:0000313|EMBL:EXI73777.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EXI73777.1};; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumuli
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B39C37
sulfatase-modifying factor protein
ar4r2_scaffold_3905_9
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9131..9316)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00037D5A54
CopG/DNA-binding domain-containing protein
CopG/DNA-binding domain-containing protein {ECO:0000313|EMBL:AEC19080.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="
ar4r2_scaffold_3905_10
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9380..9949)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Enterovibrio calviensis RepID=UPI0002E046C7
Glutamate-aspartate carrier protein {ECO:0000313|EMBL:EXI90770.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter s
sodium:dicarboxylate symporter
ar4r2_scaffold_3905_11
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9906..10430)
DNA (525bp) protein (175aa)
sodium:dicarboxylate symporter n=1 Tax=Psychrobacter lutiphocae RepID=UPI00037A2123
Glutamate-aspartate carrier protein {ECO:0000313|EMBL:EXI90770.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter s
sodium:dicarboxylate symporter
ar4r2_scaffold_3905_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10564..11982
DNA (1419bp) protein (473aa)
Sodium/proton antiporter, NhaD family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVF0_9GAMM rbh
Sodium/proton antiporter, NhaD family {ECO:0000313|EMBL:EIJ35343.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;"
citrate transporter
ar4r2_scaffold_3905_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12025..12693)
DNA (669bp) protein (223aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=870187 species="Ba
formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate deformylase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVE9_9GAMM rbh
Displaying 13 items

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