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ar4r2_scaffold_6837

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_6837_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1861
DNA (1860bp) protein (620aa)
AMP-dependent synthetase and ligase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRT9_9GAMM rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EIJ34082.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" s
AMP-dependent synthetase and ligase
ar4r2_scaffold_6837_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1854..2201
DNA (348bp) protein (116aa)
AMP-dependent synthetase and ligase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRT9_9GAMM
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EIJ34082.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" s
acyl-CoA synthetase
ar4r2_scaffold_6837_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2221..2571)
DNA (351bp) protein (117aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
twitching motility protein PilT n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624E82
nucleic acid-binding protein, contains PIN domain
ar4r2_scaffold_6837_4
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2555..2788)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Proteobacteria RepID=UPI0003660BD2
AbrB family DNA-binding protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
AbrB family DNA-binding protein
ar4r2_scaffold_6837_5
unknown

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2961..3203
DNA (243bp) protein (81aa)

This feature has no annotations

ar4r2_scaffold_6837_6
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3154..3660
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E6N7_GEOSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT19665.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (stra
ar4r2_scaffold_6837_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3650..3853)
DNA (204bp) protein (68aa)
DNA polymerase III, epsilon subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRW7_9GAMM
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EIJ34110.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix ni
ar4r2_scaffold_6837_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3871..4314)
DNA (444bp) protein (148aa)
DNA polymerase III, epsilon subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRW7_9GAMM
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EIJ34110.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix ni
DNA polymerase III subunit epsilon
ar4r2_scaffold_6837_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4311..4754)
DNA (444bp) protein (148aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRW8_9GAMM
ar4r2_scaffold_6837_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4744..5574)
DNA (831bp) protein (277aa)
Methyltransferase type 11 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRW9_9GAMM rbh
Methyltransferase type 11 {ECO:0000313|EMBL:EIJ34112.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 52
methyltransferase type 11
ar4r2_scaffold_6837_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5654..6838
DNA (1185bp) protein (395aa)
Lytic transglycosylase catalytic n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRX0_9GAMM rbh
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EIJ34113.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" sour
hypothetical protein
ar4r2_scaffold_6837_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6841..7452
DNA (612bp) protein (204aa)
FHA domain containing protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRX1_9GAMM
FHA domain containing protein {ECO:0000313|EMBL:EIJ34114.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DS
FHA domain-containing protein
ar4r2_scaffold_6837_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7433..7756
DNA (324bp) protein (108aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRX2_9GAMM
5-formyltetrahydrofolate cyclo-ligase
ar4r2_scaffold_6837_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7731..7916
DNA (186bp) protein (62aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRX2_9GAMM
5-formyltetrahydrofolate cyclo-ligase
ar4r2_scaffold_6837_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8006..8455
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000369F990
Uncharacterized protein {ECO:0000313|EMBL:EIJ34116.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
ar4r2_scaffold_6837_16
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8491..9306)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00035D964E
Uncharacterized protein {ECO:0000313|EMBL:EIM94488.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terr
hypothetical protein
ar4r2_scaffold_6837_17
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9356..10060
DNA (705bp) protein (235aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rul
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRX5_9GAMM rbh
hypothetical protein
Displaying 17 items

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