ggKbase home page

ar4r2_scaffold_2076_7

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(4349..4729)

Top 3 Functional Annotations

Value Algorithm Source
TonB system transport protein ExbD n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVU8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 128.0
  • Bit_score: 179
  • Evalue 1.90e-42
TonB system transport protein ExbD {ECO:0000313|EMBL:EIJ35491.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 128.0
  • Bit_score: 179
  • Evalue 2.70e-42
biopolymer transport protein similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 124.0
  • Bit_score: 113
  • Evalue 3.70e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGAAACGCTTTGACCAAATCAATATGATCCCTTTCATTGATATTATGCTGGTGCTGTTGGCGATTGTGCTGACTACCGCATCGTTCATTTCGCAGGGTTTGATCCCGGTGGATTTGCCGAAGGCGGAGCAAAGTCAGCAGGCGAGTAGCGATGAGAAGGTGTTGGAAATTGCTATTAATGCGCAGAACCAGATTTTCTTTGAAGGTAATCTGGTAACGGCGGCGGATTTGGGCGGGAAGTTGGATGCGCATCTCAACACTACGCCAGTGCAATTGCGGGTGGATAAAGTGGCTGCTTTTGAGCATTTCATCAGCGTAGTAGATGTGCTGAAAGCCAAGCAATTTGAGCAGCTTTCCATCCAAACTGAGCAAGTCCCGTGA
PROTEIN sequence
Length: 127
MKRFDQINMIPFIDIMLVLLAIVLTTASFISQGLIPVDLPKAEQSQQASSDEKVLEIAINAQNQIFFEGNLVTAADLGGKLDAHLNTTPVQLRVDKVAAFEHFISVVDVLKAKQFEQLSIQTEQVP*