ggKbase home page

ar4r2_scaffold_2076

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2076_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..599)
DNA (597bp) protein (199aa)
Aminoglycoside phosphotransferase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSH9_9GAMM rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EIJ34322.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nive
phosphotransferase related to Ser/Thr protein kinase
ar4r2_scaffold_2076_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

681..1130
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSH8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ34321.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
ar4r2_scaffold_2076_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1148..2056)
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVV1_9GAMM rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EIJ35494.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix
cysB; HTH-type transcriptional regulator CysB
ar4r2_scaffold_2076_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2161..3045
DNA (885bp) protein (295aa)
adenylyltransferase (EC:2.7.1.25 2.7.7.4)
ATP-sulfurylase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVV0_9GAMM rbh
ATP-sulfurylase {ECO:0000313|EMBL:EIJ35493.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ar4r2_scaffold_2076_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3131..3463)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNB9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ32862.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
ar4r2_scaffold_2076_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3585..4352)
DNA (768bp) protein (256aa)
TonB family protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVU9_9GAMM
TonB family protein {ECO:0000313|EMBL:EIJ35492.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix
tonB protein
ar4r2_scaffold_2076_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4349..4729)
DNA (381bp) protein (127aa)
TonB system transport protein ExbD n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVU8_9GAMM
TonB system transport protein ExbD {ECO:0000313|EMBL:EIJ35491.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" so
biopolymer transport protein
ar4r2_scaffold_2076_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4726..5160)
DNA (435bp) protein (145aa)
TonB-system energizer ExbB n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVU7_9GAMM
TonB-system energizer ExbB {ECO:0000313|EMBL:EIJ35490.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Th
biopolymer transporter ExbB
ar4r2_scaffold_2076_9
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5173..5817)
DNA (645bp) protein (215aa)
Cytochrome C biogenesis protein, transmembrane region n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAX7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KHF24846.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
cytochrome C biogenesis protein, transmembrane region
ar4r2_scaffold_2076_10
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5817..6872)
DNA (1056bp) protein (352aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJ76_9PROT rbh
4Fe-4S ferredoxin {ECO:0000313|EMBL:GAO36694.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
4Fe-4S ferredoxin iron-sulfur binding domain protein
ar4r2_scaffold_2076_11
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6869..7696)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B7C8_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN36347.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
ar4r2_scaffold_2076_12
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7709..9844)
DNA (2136bp) protein (712aa)
TonB-dependent receptor n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BU8_DECAR rbh
TonB-dependent receptor
Tax=BJP_IG2103_Dechloromonas_63_51
ar4r2_scaffold_2076_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10301..11266
DNA (966bp) protein (322aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVU5_9GAMM rbh
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:EIJ35488.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" s
Fis family transcriptional regulator
ar4r2_scaffold_2076_14
Pseudomonas lutea, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11409..11684
DNA (276bp) protein (92aa)
Cytochrome bd quinol oxidase subunit 1 apoprotein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVU4_9GAMM
Cytochrome d terminal oxidase subunit 1 {ECO:0000313|EMBL:KGF65754.1}; TaxID=243924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
cydA; Cytochrome bd ubiquinol oxidase, subunit I
Displaying 14 items

View Taxonomy