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ar4r2_scaffold_4084_5

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 3207..3989

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion protein SpaR/YscT/HrcT n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWL7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 260.0
  • Bit_score: 394
  • Evalue 7.90e-107
  • rbh
Type III secretion protein SpaR/YscT/HrcT {ECO:0000313|EMBL:EIJ35760.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thioth similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 260.0
  • Bit_score: 394
  • Evalue 1.10e-106
preprotein translocase T similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 244.0
  • Bit_score: 187
  • Evalue 4.10e-45

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGGAAACGGGTTTATTACAATCGTGGTTAATGGCATGGGCGTTCACCGCCCCACGGGTGTTGATTGTGTTTGCGATCCTGCCTATTTTAACCGAACCGGTTGTCCCGCAAACCTTGCGTAATGGCATTGTGCTGATTTTATCATTGTACGTGCTGCCATTAACCCATGAGCAATTTCTTAATATTGACCTCAACCTCATGAATATGATGGCAATTGTGGTGAAAGAAGCGTTGCTGGGATTAATGATTGGTTACGTCTTAAGTGTGCCGTTTTGGGCAGTAAAAGCCACCGGCTTCCTAATTGATATGCAGCGCGGTGTCATGAGTGCGCTGTTTTTCTCACACACCACCGGCAATATGGTGTCACCTTTAGGTAATTTATTCAGCCTGTTACTCACCACCTTGCTGCTCACGACAGGTGGCTTTCTGACATTGTTAGAAACCCTGTTTTTAAGTTACCAAACCTGGCCGATGGATCAATTTGTATTTGGTACAAGCCCGGAGATTGTAACCTTTTTCCTAAAACAACTGGATTTATTACTTTACACCAGCTTATTACTCGCAGGCCCGTTACTTGGCATTATGTTCTTAATTGATATTGGCACGGGTCTGGTGGGGCGTTTCCTGCCACAATTAAATATCTTTTTAGTGGCTATGCCAATTAAAAGCGGTGTTACCTTTTTGATGCTGGCGTTGTATATCTCGTTTTTAGCGGATTATATGAAAACCAGCTTTTTCACCATCGGACAAAACTTGCCGGGACTGGCGGGGCTATTGCGATGA
PROTEIN sequence
Length: 261
METGLLQSWLMAWAFTAPRVLIVFAILPILTEPVVPQTLRNGIVLILSLYVLPLTHEQFLNIDLNLMNMMAIVVKEALLGLMIGYVLSVPFWAVKATGFLIDMQRGVMSALFFSHTTGNMVSPLGNLFSLLLTTLLLTTGGFLTLLETLFLSYQTWPMDQFVFGTSPEIVTFFLKQLDLLLYTSLLLAGPLLGIMFLIDIGTGLVGRFLPQLNIFLVAMPIKSGVTFLMLALYISFLADYMKTSFFTIGQNLPGLAGLLR*