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ar4r2_scaffold_4084_6

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 3986..5044

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion exporter n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWL6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 349.0
  • Bit_score: 452
  • Evalue 4.30e-124
  • rbh
Type III secretion exporter {ECO:0000313|EMBL:EIJ35759.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 349.0
  • Bit_score: 452
  • Evalue 6.00e-124
YscD family type III secretion protein similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 347.0
  • Bit_score: 210
  • Evalue 8.00e-52

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
ATGAGCGGGGATAGCAGCCAAGAAAAAACCGAAGAAGCCTCGCACCGCAAACTCGAAAAAGCGCGGGAACATGGTCAAGTTGCACGCAGCACCGACTTACCATCGACGCTGGTACTGACCGTAGTGATTTTTTACTTATGGTTTACCTGGGACTGGACTTTGGAGCAATTGCAGGAAGTTTTTGTGCTCACACCGCAACTGTTCGCGATGGACTTTCATCAAGCCCTGCAAGCTGGTTTGCAAACCATTATTTACCAGCCGATGTTAACCATTGCACTGCCATTGGCACTGGTAGCAACACTGGCTGGCATTATTGGCAACTTGATTCAATTTGGCTTTTTGTTTTCTTTTGAAAGCATTACCCCCAATTTTAGCAAAATCAGCCTATCCAGCGGTTTTCAACGGATGTTTTCTGCCAAACAAGCGATAACTACGCTGCTGTCATTGTTCAAAACATTAATCATCGGCGGAATTACCGTTTGGGTGCTTTATGTGGGCATGAGGGAGTTACTGCACGCGGTTGAACAATGTGACGTTGCCTGCCAGCAACACATTATTGAATACCTGTTGCGGCAATTGGTGATTTTTGTGTTGCCCGTTTTAGTGGTCATGGCGGTATTGGATTACTTATTTCAACGTTCGCAATTTATGAAAGAGCAGCGTATGACCAAGGAAGAGGTCAAGCACGAAATGAAAGACTCGTTTGGTGACCCGCACGTGCGTGGTGCACGCGACGGAATGCGCCGGGAACTCGCCGAACATGACATCCAGCAACGGATTCGTACAGCTCGTCTTCTAGTTCTCGACATGGGCACGGCAATTGCGTTGCAATACGAGCAAGGTGTTACGCCGCTGCCTGTCATTGTGGCAATTGGTAAGGGCATGATGGCACGTAAAATGGTGGAAATTGCGACCAAGGAAAATGTTACGTTGGTCACTAACCCCACACTGGCACAAGCATTGATCAAGGAAGGCAAGGTTGATCAATACATTCCTGACAGCACCATCAATGCAGTAGCGCAAGCCATGCGCCAGACAACTGCTAAACCGAAACGCTAA
PROTEIN sequence
Length: 353
MSGDSSQEKTEEASHRKLEKAREHGQVARSTDLPSTLVLTVVIFYLWFTWDWTLEQLQEVFVLTPQLFAMDFHQALQAGLQTIIYQPMLTIALPLALVATLAGIIGNLIQFGFLFSFESITPNFSKISLSSGFQRMFSAKQAITTLLSLFKTLIIGGITVWVLYVGMRELLHAVEQCDVACQQHIIEYLLRQLVIFVLPVLVVMAVLDYLFQRSQFMKEQRMTKEEVKHEMKDSFGDPHVRGARDGMRRELAEHDIQQRIRTARLLVLDMGTAIALQYEQGVTPLPVIVAIGKGMMARKMVEIATKENVTLVTNPTLAQALIKEGKVDQYIPDSTINAVAQAMRQTTAKPKR*