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ar4r2_scaffold_13522_7

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 4737..6347

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=870187 species="Bacteria; Proteobacteria; Gam similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 534.0
  • Bit_score: 939
  • Evalue 2.50e-270
Ribonuclease E n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQ10_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 534.0
  • Bit_score: 939
  • Evalue 1.80e-270
  • rbh
ribonuclease E similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 538.0
  • Bit_score: 730
  • Evalue 2.70e-208

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1611
ATGAAACGTATTTTAATTAATGCCACGCAACCGGAAGAAATCCGGGTTGCAATGGTCGACGGGCAACGCCTGTACGATCTCGATATTGAGCACCCTTTTCGCGCTCAAAAGAAAGCAAATATCTACAAAGGTGTAATCACCCGTATTGAGCCTAGCTTAGAAGCGGCTTTTGTCAATTATGGCGCACAACGCCACGGCTTTTTATCTTTCCGCGAAGTTGCCCCTGAGTTTTATCAAGGCGAAGCGAAAAATAATGCGCGTCCCAACGTCAAAGACATGCTCCGCGAAGGCCAAGAAGTGCTGGTGCAGGTGGACAAGGAAGAGCGTGGCAACAAGGGCGCGGCACTGACCACGTACTTAAGCCTTGCCGGACGCTATCTGGTATTGATGCCCAACAACCCGAAAGCAGGTGGGGTTTCGCGCCGTATTGAGGGTGAAGATCGTCAGCAAATCAAACAAACCCTGAACGAACTTGATGTTCCAGACAGCATGGGCGTGATTGTACGTACTGCTGGCATTGACCGCGAAGCTGAAGAGTTATCGTGGGATTTGGACTACCTCAAGACCTTATGGGCAGCGATTCAGCAGGCTTACACCCAGCACAAAGGCCCTACCCTGCTTTATCAGGAAAGCAACGTCATTATTCGTGCTTTGCGGGACTATTTCCGCCGCGACATTGGCGAAATCGTGGTCGACGATGAGAAAGTTTACAAGCAAGCCCGCGATTTCATGCAGGCAGTCATGCCGCATAACATCCGCAAGCTGAAACATTACACTGATGGCACACCGCTGTTTAGCCGCTATCAAGTTGAAAATCAAATTGAAACAGCGTATCAGCGCACCGTGGGCTTGCCGTCCGGCGGGGCGATTGTGATTGACCACACCGAAGCGTTGATTTCCATCGACATCAACTCAGCACGTGCCACCAAAGGGCATGACATTGAGGAAACCGCGCTCAATACCAACCTCGAAGCTGCTGACGAAATCGCCCGTCAATTGCGTTTACGGGATTTGGGCGGCTTGGTGGTGATCGACTTTATTGACATGTTACCCAGCAAACACCAGCGCGAAGTTGAAAAACGCCTGCGTGATGCCATGAAACTTGACCGCGCACGGGTTCAAGTCGGGCGCATTTCACGCTTTGGTTTGCTGGAAATGTCACGTCAACGCCTGCGCCCTTCCTTGGGTGAATCCAGCCAAATCGTGTGCCCACGCTGCACCGGGCATGGTCATATTCGCAGCACTGACTCATTGGCACTGTCGATTTTGCGCCTCATGGAAGAAGAAGCCATGAAGGAAATGACTGCCAAGGTCATTACCCAAGTGCCAGTTGCAGTCGCGAGTTTCTTACTCAATGAAAAACGTCAGGCTCTGGCTGATATTCAGGCACGCCGCAACATTGAGCTGCTGGTCATTCCTAACCCTTACCTCGATACGCCGCACTACGAAATCAGCCGTATCCGCAGCGATGGTCTGGAAGTGGAAGATGTTGCCAGTTACAAGCACATCCCTGAACCACCAGCATTAGAAGACACCACGCAGCAAGAAAACCTGCCAAAGCAATTGCCAGTGGAAGCGGCTGTTACAGCACGCCAGCCAGCGATACAGTAA
PROTEIN sequence
Length: 537
MKRILINATQPEEIRVAMVDGQRLYDLDIEHPFRAQKKANIYKGVITRIEPSLEAAFVNYGAQRHGFLSFREVAPEFYQGEAKNNARPNVKDMLREGQEVLVQVDKEERGNKGAALTTYLSLAGRYLVLMPNNPKAGGVSRRIEGEDRQQIKQTLNELDVPDSMGVIVRTAGIDREAEELSWDLDYLKTLWAAIQQAYTQHKGPTLLYQESNVIIRALRDYFRRDIGEIVVDDEKVYKQARDFMQAVMPHNIRKLKHYTDGTPLFSRYQVENQIETAYQRTVGLPSGGAIVIDHTEALISIDINSARATKGHDIEETALNTNLEAADEIARQLRLRDLGGLVVIDFIDMLPSKHQREVEKRLRDAMKLDRARVQVGRISRFGLLEMSRQRLRPSLGESSQIVCPRCTGHGHIRSTDSLALSILRLMEEEAMKEMTAKVITQVPVAVASFLLNEKRQALADIQARRNIELLVIPNPYLDTPHYEISRIRSDGLEVEDVASYKHIPEPPALEDTTQQENLPKQLPVEAAVTARQPAIQ*