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ar4r2_scaffold_13522_8

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 6389..7831

Top 3 Functional Annotations

Value Algorithm Source
rne; ribonuclease E (EC:3.1.26.12) similarity KEGG
DB: KEGG
  • Identity: 30.4
  • Coverage: 514.0
  • Bit_score: 157
  • Evalue 8.40e-36
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=287 species="Bacteria; Proteobacteria; Gammap similarity UNIPROT
DB: UniProtKB
  • Identity: 29.5
  • Coverage: 492.0
  • Bit_score: 155
  • Evalue 2.10e-34
Ribonuclease E n=1 Tax=Pseudomonas aeruginosa (strain LESB58) RepID=B7V152_PSEA8 similarity UNIREF
DB: UNIREF100
  • Identity: 29.0
  • Coverage: 458.0
  • Bit_score: 152
  • Evalue 9.60e-34

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
TTGGTACGACGGATTTTCAACAGCCTGTTTGGGAGCAATCCCAAGGCTGAAAAAGCCGCAGAAGCTGCTGAAAAAGCGGTTGCTGATACCGAACGCAAAGATGAAGCGCAACGTCAAGATCGCCAAGGCCGCCGTAACAATAACCCGCGTTACGAACGTAATGACCGTAACAATGATCGCCGCGAACGCAATCCTCCACGCACTCAAGACAATGCGGAGGCAGAGGCAGGCGAAGATAATCGTCAGCAACAACGTCGCCCTAACGAACGAACTGAGCGTAACGACCGCCAACCACGTAACGACCGTAATGGCAACCAACGTCAACAAGGGCGTGAACAGCGCGAACCGCAACAACAGCGTGAACGTGAGCCTGCACAAGACACTCGTGAACCGCAACAGCAACGTGAACCGCGTGAGCAACGTGAACCGCGTGAGCAACGTGAACCGCGTGAGCAACGCGATAACCGTGAACCGCAGCAGCAACGTGAGCCGCGTGAACAACGTGATGGCAACCAACAACGCCAACAACGCCAAGAGCAACGTCAGCCGCGTAACGACCGTCAGCAACGCCGTTACGAACAACCCATTGCTAACGCTGATGATGTTGAAAACCTGCCGCCTGTCGAAATCAGCTTAATGCCGATCGACGACAATGCCGGTTCTGACCGACCGAATGAGCAAGGCCAGCGCACCCGCAACCGCCGTGATCGTAACCGCCGTGACCGTCGTGATGAGCGTCGCCCGGAAACCAATAGTGCAGACGCAACGGAGCAGCAGGCGGCTGAGAATGATGCGGTTAACCCCAACGCTCCAATGCCGATTGTGGTGGTAACATCCATTGCGGATTTAACCCCACTCCACGCGCCAGCACCTAAACGCCATGCACCGCCAGCAAGCGAGTTTGACGACGAACCAGCCGATGAGATGCCAACGGAAGCACTGAACGCAGAGGAGTCAACGCAGGACGATGCTGAAATTCAGCAACGCCCACCACGCGAATACCGCGAACGGCGCGGTCGCACACGTCGCCCTCGTGGTGGTCAAGACCGTGACCGTCCGCGTCCACCACGTCCGGCAACGGATCACGAAATCACGCAAGAGTCACTGGAACCATTCGTGATTGACTTAAACCCCGAAAAACCGGCAAAAGTCGAACGTGCGCCGCAAATCGTGGTGGAAAGCCAACCGCCTGCAACACCCGTCGTCGTTGCTGAGGTAGCTGCACCTGCGCCAAAACCGGAAGTGGTGCTTGCTGTAGAACCTCCCAAAGCCGTTGTGGTTACACCTGAGCCACCGCCGCCAGCACAGCCGGAAGTGGTAACACCTATCGTGGCAGCACCAGCAGTGGCGGTAACACCGGAAGTGGTCACAGCCAACGAAACGGCAGAAGCGGAACCCGCACCGGCTCCGAAGAAACGCCCTTCATGGATGCACGCCGAATAA
PROTEIN sequence
Length: 481
LVRRIFNSLFGSNPKAEKAAEAAEKAVADTERKDEAQRQDRQGRRNNNPRYERNDRNNDRRERNPPRTQDNAEAEAGEDNRQQQRRPNERTERNDRQPRNDRNGNQRQQGREQREPQQQREREPAQDTREPQQQREPREQREPREQREPREQRDNREPQQQREPREQRDGNQQRQQRQEQRQPRNDRQQRRYEQPIANADDVENLPPVEISLMPIDDNAGSDRPNEQGQRTRNRRDRNRRDRRDERRPETNSADATEQQAAENDAVNPNAPMPIVVVTSIADLTPLHAPAPKRHAPPASEFDDEPADEMPTEALNAEESTQDDAEIQQRPPREYRERRGRTRRPRGGQDRDRPRPPRPATDHEITQESLEPFVIDLNPEKPAKVERAPQIVVESQPPATPVVVAEVAAPAPKPEVVLAVEPPKAVVVTPEPPPPAQPEVVTPIVAAPAVAVTPEVVTANETAEAEPAPAPKKRPSWMHAE*