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ar4r2_scaffold_10378_11

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 7820..9367

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 interacting domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BT49_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 528.0
  • Bit_score: 877
  • Evalue 7.90e-252
Sigma 54 interacting domain protein {ECO:0000313|EMBL:EIJ34542.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix ni similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 528.0
  • Bit_score: 877
  • Evalue 1.10e-251
RtcR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 531.0
  • Bit_score: 601
  • Evalue 1.80e-169

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1548
ATGAAAACCACCGTCATCGGCATCCTCGGCTCGCGCCTTGACCACCAAGGCTTAGGTAAACGCCGCCATTCGCGCTGGCGGCCTTCCGTCGGTATCCTCATGCACCCCGATTTTCCGGTGGATGAATTCGTACTGATTCACCACGAAGACGAGGCCGAACTGGCGGGTATCACCTTGCGTGACATGCGCGAACTTGCCCCCAACACGCGCCTCACCAGCCACGTCGTCAACTACAACAACCCTTGGGATTTCGGCGAAGTTTACAGCCAGCTCCACGATTTCACCCGCCACTACCGTTTCGACCCGGAACAAAACCACTACTACGTCCACATCACCACGGGTACACACGTCGCGCAAATCTGCCTGTTTTTGCTGACCGAAGCGAATTACATCCCCGGCAAGCTGCTACAAACATCGCCCAGCAAGGAAAGCACGCAAGGCACGCTGCAAATCATCGACCTCGACCTGTCGCGCTACGACCAAATCGCCAGCCGCTTCGAGCGCGAAGCACAGGAAGGCATGGCGTACCTGAAAAGCGGCATCGACACCCGCAACCCCGCCTTCAACGCCCTGATTGCGCAACTCGAACAAGTGTCGATCCGTTCCGCCGCGCCTATCCTGATCACGGGTGCTACAGGTGTCGGCAAGTCGCGCCTCGCCAAACGCATTTACGCACTCAAAAAACAACGAGGGCAAGTCAGCGGCAAACTGGTGGAAGTCAACTGCGCCACCTTGCGCGGAGACAATGCACTCACCGCTCGCACCGGCTTGCTGCGTGAAGCCGACAAGGGTTTGCTGTTTCTGGATGAAATCGGCGAACTGGGGCTGGACGAACAAGCGATGTTGTTACGAGCCATCGAAGACAAAGTATTCACCCCCTTCGGCAGCGACAAGGAAACCAGCAGCGATTTCCAACTGATTGCCGGAACCAACCGCGACCTGTTCCAACGGGTACGCGACGGTAAATTCCGCGAAGACTTGCTGGCTCGCATCAATTTGTGGACATACGAACTCCCCGGTCTACGCCACCGCCTCGAAGATTTGGAAGCGAATATCGAATACGAATTGCAGCAATTCACCCGCAAGGTCGGTCACAAAGTCAGCTTCAACAAAGCGGCGCGGGAACAATACCTCGCGTTTGCGCAAACCCCGGCGGCAACTTGGCGGGCGAATTTCCGCGACCTCAATTCCAGCATCACGCGCATGGCAACGCTGGCAAATGGCGGGCGGATTACCGAGGAAAGCGTGACGGAGGAAATCCGCCGCTTGCGCTACGATTGGGGCAGTTTTCAGGAAGCAACAGCCAGCAATAATACCGATAGCATCTTGCGCGAATTCGTGGTGGCTGAGGTGCTGGAAACCATCGACCATTTCGATCGGGTGCAGTTGGCGGAAGTCATCCGCGTGTGCCGCACCGCCAAAAGTCTTGCAGATGCAGGGCGCAGTCTGTTCAACGTCAGCCGCACCCAACGCGCCAGCGCGAACGATTCGCATCGCTTGCGGGTGTATTTGCAGAAATACGGGCTAACTTTCCAGCAACTCACCTAA
PROTEIN sequence
Length: 516
MKTTVIGILGSRLDHQGLGKRRHSRWRPSVGILMHPDFPVDEFVLIHHEDEAELAGITLRDMRELAPNTRLTSHVVNYNNPWDFGEVYSQLHDFTRHYRFDPEQNHYYVHITTGTHVAQICLFLLTEANYIPGKLLQTSPSKESTQGTLQIIDLDLSRYDQIASRFEREAQEGMAYLKSGIDTRNPAFNALIAQLEQVSIRSAAPILITGATGVGKSRLAKRIYALKKQRGQVSGKLVEVNCATLRGDNALTARTGLLREADKGLLFLDEIGELGLDEQAMLLRAIEDKVFTPFGSDKETSSDFQLIAGTNRDLFQRVRDGKFREDLLARINLWTYELPGLRHRLEDLEANIEYELQQFTRKVGHKVSFNKAAREQYLAFAQTPAATWRANFRDLNSSITRMATLANGGRITEESVTEEIRRLRYDWGSFQEATASNNTDSILREFVVAEVLETIDHFDRVQLAEVIRVCRTAKSLADAGRSLFNVSRTQRASANDSHRLRVYLQKYGLTFQQLT*