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ar4r2_scaffold_10378

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_10378_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..140
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BU01_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ34844.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
ar4r2_scaffold_10378_2
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1911..2102
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00037A9436
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
ar4r2_scaffold_10378_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2103..2381
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BU17_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ34860.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
ar4r2_scaffold_10378_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2345..3073
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BU17_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ34860.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
ar4r2_scaffold_10378_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3053..4234)
DNA (1182bp) protein (394aa)
Transcriptional regulator domain-containing protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BU18_9GAMM rbh
Transcriptional regulator domain-containing protein {ECO:0000313|EMBL:EIJ34861.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" sour
histidine kinase
ar4r2_scaffold_10378_6
Pseudoalteromonas ruthenica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4344..4583)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ00373.1}; TaxID=151081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudo
ar4r2_scaffold_10378_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4761..5009
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BX57_9GAMM
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ35950.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
ar4r2_scaffold_10378_8
unknown

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5036..5440
DNA (405bp) protein (135aa)

This feature has no annotations

ar4r2_scaffold_10378_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5455..6612)
DNA (1158bp) protein (386aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichacea
RTCB protein n=1 Tax=Leucothrix mucor RepID=UPI0003B4655F rbh
RtcB protein
ar4r2_scaffold_10378_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6772..7656)
DNA (885bp) protein (295aa)
Fructosamine/Ketosamine-3-kinase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUK8_9GAMM rbh
Fructosamine/Ketosamine-3-kinase {ECO:0000313|EMBL:EIJ35051.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea
fructosamine-3-kinase
ar4r2_scaffold_10378_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7820..9367
DNA (1548bp) protein (516aa)
Sigma 54 interacting domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BT49_9GAMM
Sigma 54 interacting domain protein {ECO:0000313|EMBL:EIJ34542.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix ni
RtcR family transcriptional regulator
ar4r2_scaffold_10378_12
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9542..10249
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI0003701ED1
TRAP dicarboxylate transporter subunit DctP; K11688 C4-dicarboxylate-binding protein DctP Tax=CG_Rhodocyc_01
Bacterial extracellular solute-binding protein,family 7
ar4r2_scaffold_10378_13
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10438..11058
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037BC576 rbh
dctQ; C4-dicarboxylate transport system permease, small subunit
C4-dicarboxylate transport system permease, small subunit {ECO:0000313|EMBL:BAL24232.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;"
ar4r2_scaffold_10378_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11055..11417
DNA (363bp) protein (121aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BR0_DECAR
TRAP dicarboxylate transporter, DctM subunit
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:AAZ47721.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechlo
Displaying 14 items

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