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ar4r2_scaffold_2813

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2813_1
Sulfurovum lithotrophicum, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(8..1393)
DNA (1386bp) protein (462aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Alvinella pompejana epibiont 6C6 RepID=Q6W3N7_9PROT
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:AKF25527.1}; TaxID=206403 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum lithotrophicum.;"
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
ar4r2_scaffold_2813_2
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(1395..1628)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q9X7_SULNB
Uncharacterized protein {ECO:0000313|EMBL:KIM03042.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
hypothetical protein
ar4r2_scaffold_2813_3
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1688..2371)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EX21_EMTOG
Uncharacterized protein {ECO:0000313|EMBL:GAL87378.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
protein of unknown function DUF1287
ar4r2_scaffold_2813_4
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2417..2779)
DNA (363bp) protein (121aa)
Methionine sulfoxide reductase B {ECO:0000313|EMBL:KIM02827.1}; EC=1.8.4.12 {ECO:0000313|EMBL:KIM02827.1};; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source
msrB; peptide methionine sulfoxide reductase MsrB (EC:1.8.4.12)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H9P8_9BACT
ar4r2_scaffold_2813_5
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(2779..4080)
DNA (1302bp) protein (434aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
hypothetical protein n=1 Tax=Sulfurovum sp. SCGC AAA036-F05 RepID=UPI00037B5A8D
ar4r2_scaffold_2813_6
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4077..4646)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6WYM7_NITSE
Uncharacterized protein {ECO:0000313|EMBL:KIM02829.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
hypothetical protein
ar4r2_scaffold_2813_7
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(4640..4924)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Sulfurovum sp. AR RepID=I2K5Q2_9PROT
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KIM02830.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
hypothetical protein
ar4r2_scaffold_2813_8
unknown

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comp(5069..5182)
DNA (114bp) protein (38aa)

This feature has no annotations

ar4r2_scaffold_2813_9
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5821..6171)
DNA (351bp) protein (117aa)
50S ribosomal protein L17 n=1 Tax=sediment metagenome RepID=D9PMM5_9ZZZZ
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp.
LSU ribosomal protein L17p
ar4r2_scaffold_2813_10
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6168..7178)
DNA (1011bp) protein (337aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:KIM02832.1}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rul
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Sulfurovum sp. SCGC AAA036-F05 RepID=UPI00037B6A9F
ar4r2_scaffold_2813_11
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7196..7822)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Sulfurovum sp. SCGC AAA036-F05 RepID=UPI0003692C34
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000313|EMBL:KIM02833.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS
30S ribosomal protein S4
ar4r2_scaffold_2813_12
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7883..8257)
DNA (375bp) protein (125aa)
30S ribosomal protein S11 n=1 Tax=sediment metagenome RepID=D9PMM8_9ZZZZ
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310, ECO:0000313|EMBL:KIM02834.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. A
30S ribosomal protein S11
ar4r2_scaffold_2813_13
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8272..8634)
DNA (363bp) protein (121aa)
30S ribosomal protein S13 n=1 Tax=sediment metagenome RepID=D9PMM9_9ZZZZ
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315, ECO:0000313|EMBL:KIM02835.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. A
30S ribosomal protein S13
ar4r2_scaffold_2813_14
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8637..8750)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6WYM1_NITSE
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp.
50S ribosomal protein L36
Displaying 14 items

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