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ar4r2_scaffold_554

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_554_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

3..653
DNA (651bp) protein (217aa)
adenine specific DNA methylase Mod; K07316 adenine-specific DNA-methyltransferase [EC:2.1.1.72] Tax=GWB1_Spirochaetes_36_13_curated
DNA methylase N-4/N-6 domain protein id=2674864 bin=GWB1_CP_36_13 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
adenine specific DNA methylase Mod
ar4r2_scaffold_554_2
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

658..1632
DNA (975bp) protein (325aa)
Death-on-curing protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AQK0_CHLCH rbh
death-on-curing protein
Death-on-curing protein {ECO:0000313|EMBL:ABB28725.1}; TaxID=340177 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
ar4r2_scaffold_554_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

1629..4595
DNA (2967bp) protein (989aa)
restriction endonuclease Tax=GWB1_Spirochaetes_36_13_curated
Putative uncharacterized protein id=2674867 bin=GWB1_CP_36_13 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
restriction endonuclease
ar4r2_scaffold_554_4
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

4624..8166
DNA (3543bp) protein (1181aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q7R8_SULNB
ar4r2_scaffold_554_5
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8163..8369)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6WYU6_NITSE
Uncharacterized protein {ECO:0000313|EMBL:KIM03985.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
hypothetical protein
ar4r2_scaffold_554_6
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8373..8906)
DNA (534bp) protein (178aa)
Molybdenum cofactor biosynthesis protein B n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q9G7_SULNB
Molybdopterin adenylyltransferase {ECO:0000313|EMBL:KIM03986.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
molybdenum cofactor biosynthesis protein B
ar4r2_scaffold_554_7
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8919..9620)
DNA (702bp) protein (234aa)
Methyltransferase type 12 n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X0S9_NITSE
Methyltransferase type 12 {ECO:0000313|EMBL:KIM07279.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
type 12 methyltransferase
ar4r2_scaffold_554_8
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9617..10240)
DNA (624bp) protein (208aa)
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Sulfurovum sp. AR RepID=I2K4W3_9PROT
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; E
ar4r2_scaffold_554_9
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10234..10869)
DNA (636bp) protein (212aa)
Transcriptional activator, Baf family n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q7C4_SULNB
Pantothenate kinase {ECO:0000313|EMBL:KIM03372.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
pantothenate kinase
ar4r2_scaffold_554_10
Sulfurospirillum barnesii, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

10943..12655
DNA (1713bp) protein (571aa)
Putative hemolysin n=1 Tax=Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3) RepID=I3XZ72_SULBS
putative hemolysin
Putative hemolysin {ECO:0000313|EMBL:AFL69246.1}; TaxID=760154 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospiri
ar4r2_scaffold_554_11
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

12659..14068
DNA (1410bp) protein (470aa)
cca; polynucleotide adenylyltransferase/metal-dependent phosphohydrolase (EC:2.7.7.72)
Multifunctional CCA protein n=1 Tax=sediment metagenome PF41_9ZZZZ">RepID=D9PF41_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KIM04737.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_554_12
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14045..14356)
DNA (312bp) protein (104aa)
Putative periplasmic protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DT31_THIND
putative periplasmic protein
Putative periplasmic protein {ECO:0000313|EMBL:AGA32145.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thio
ar4r2_scaffold_554_13
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14371..15324)
DNA (954bp) protein (318aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIM04738.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
Putative uncharacterized protein id=1937672 bin=GWB2_CP_45_9 species=Shewanella sediminis genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
ar4r2_scaffold_554_14
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

15444..16733
DNA (1290bp) protein (430aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6WXW2_NITSE
trigger factor
ar4r2_scaffold_554_15
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

16762..17349
DNA (588bp) protein (196aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=CLPP_SULNB
ar4r2_scaffold_554_16
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

17364..17885
DNA (522bp) protein (174aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6WXW4_NITSE
ar4r2_scaffold_554_trna_1
unknown

Not on your lists

17939..18012
DNA (74bp)
transferRNA
ar4r2_scaffold_554_17
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18044..18409)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Nitratiruptor sp. (strain SB155-2) RepID=A6Q2W7_NITSB
Uncharacterized protein {ECO:0000313|EMBL:KIM09958.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
hypothetical protein
ar4r2_scaffold_554_18
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

18469..19323
DNA (855bp) protein (285aa)
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=FOLD_SULNB
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_554_19
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

19320..20180
DNA (861bp) protein (287aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfuro
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q814_SULNB
ar4r2_scaffold_554_20
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

20194..20640
DNA (447bp) protein (149aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=1 Tax=Sulfurovum sp. AR RepID=I2K853_9PROT
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:KIM02781.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_554_21
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


20653..23280
DNA (2628bp) protein (876aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QA19_SULNB
ar4r2_scaffold_554_22
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

23334..24557
DNA (1224bp) protein (408aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000256|SAAS:SAAS00015859};; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilo
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X1E6_NITSE
ar4r2_scaffold_554_23
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

24550..26004
DNA (1455bp) protein (485aa)
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00015246};; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:00
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Sulfurovum sp. AR RepID=I2K859_9PROT
ar4r2_scaffold_554_24
Sulfurovum sp. AR, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

26143..27213
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Sulfurovum sp. AR RepID=I2K9N0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EIF51932.1}; TaxID=1165841 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AR.;"
hypothetical protein
ar4r2_scaffold_554_25
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

27587..27916
DNA (330bp) protein (110aa)
Ammonium transporter n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U2X7_SULKY
Ammonium transporter {ECO:0000256|RuleBase:RU362002, ECO:0000313|EMBL:KIM05516.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;
ammonium transporter
ar4r2_scaffold_554_26
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

28032..28373
DNA (342bp) protein (114aa)
Nitrogen regulatory protein P-II n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X3K2_NITSE
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:KIM05517.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
nitrogen regulatory protein p-ii
ar4r2_scaffold_554_27
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

28537..29709
DNA (1173bp) protein (391aa)
Ammonium transporter n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QAT1_SULNB
Ammonium transporter {ECO:0000313|EMBL:KIM05518.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ammonium transporter
ar4r2_scaffold_554_28
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(29866..30897)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002FAEF9A
ribosome assembly protein 4
Ribosome assembly protein 4 (RSA4) {ECO:0000313|EMBL:ABA21179.1}; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / P
ar4r2_scaffold_554_29
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30861..31085)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:KIM02797.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
Displaying 30 items

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