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ar4r2_scaffold_3271

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_3271_1
unknown

Not on your lists

comp(3..92)
DNA (90bp) protein (30aa)

This feature has no annotations

ar4r2_scaffold_3271_2
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(169..1536)
DNA (1368bp) protein (456aa)
DNA repair protein radA n=1 Tax=Beggiatoa alba B18LD RepID=I3CG18_9GAMM rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;
DNA repair protein RadA
ar4r2_scaffold_3271_3
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1599..2006)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RT26_SPITD
Hemerythrin-like metal-binding protein {ECO:0000313|EMBL:KJU87567.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magne
Methyl-accepting chemotaxis protein
ar4r2_scaffold_3271_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2931..3317)
DNA (387bp) protein (129aa)
Putative transcription factor, MBF1 like protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GHW7_METAL
transcription factor, MBF1
Transcription factor, MBF1 {ECO:0000313|EMBL:BAP56890.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_3271_5
unknown

Not on your lists

3426..3881
DNA (456bp) protein (152aa)

This feature has no annotations

ar4r2_scaffold_3271_6
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3906..4460)
DNA (555bp) protein (185aa)
Probable chorismate pyruvate-lyase {ECO:0000256|HAMAP-Rule:MF_01632}; Short=CL {ECO:0000256|HAMAP-Rule:MF_01632};; Short=CPL {ECO:0000256|HAMAP-Rule:MF_01632};; EC=4.1.3.40 {ECO:0000256|HAMAP-Rule:MF_
chorismate-pyruvate lyase (EC:4.1.3.40)
Probable chorismate pyruvate-lyase n=1 Tax=Beggiatoa sp. PS RepID=A7BX56_9GAMM
ar4r2_scaffold_3271_7
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4457..7240)
DNA (2784bp) protein (928aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C894_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57836.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_3271_8
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7843..9711)
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BS04_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EDN70680.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
ar4r2_scaffold_3271_9
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10073..10555)
DNA (483bp) protein (161aa)
Type II secretion system protein M n=1 Tax=Beggiatoa alba B18LD RepID=I3CG54_9GAMM
Type II secretion system protein M {ECO:0000256|PIRNR:PIRNR006291}; Short=T2SS protein M {ECO:0000256|PIRNR:PIRNR006291};; General secretion pathway protein M {ECO:0000256|PIRNR:PIRNR006291}; TaxID=39
type II secretory pathway, component PulM
ar4r2_scaffold_3271_10
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10615..11274)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00037EB6F4
Uncharacterized protein {ECO:0000313|EMBL:EEG06917.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenk
hypothetical protein
ar4r2_scaffold_3271_11
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11267..12571)
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000381B71D rbh
RloA protein {ECO:0000313|EMBL:EEG06918.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferro
hypothetical protein
ar4r2_scaffold_3271_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12678..13277)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CHI7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP54988.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_3271_13
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13305..14738)
DNA (1434bp) protein (478aa)
GTPase Der n=1 Tax=Beggiatoa alba B18LD RepID=I3CBX9_9GAMM rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobact
GTP-binding protein EngA
ar4r2_scaffold_3271_14
unknown

Not on your lists

comp(15242..15346)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 14 items

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