ggKbase home page

ar4r2_scaffold_1004

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1004_1
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(331..1959)
DNA (1629bp) protein (543aa)
HD-GYP domain-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CBZ7_9GAMM rbh
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:BAP54718.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingric
ar4r2_scaffold_1004_2
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1967..2821)
DNA (855bp) protein (285aa)
Bifunctional protein FolD n=1 Tax=Beggiatoa alba B18LD RepID=I3CF79_9GAMM rbh
tetrahydrofolate dehydrogenase/cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;
ar4r2_scaffold_1004_3
unknown

Not on your lists

2936..3199
DNA (264bp) protein (88aa)

This feature has no annotations

ar4r2_scaffold_1004_4
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3296..3556
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD06376.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
ar4r2_scaffold_1004_5
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3928..4875
DNA (948bp) protein (316aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Beggiatoa sp. PS RepID=A7BWR1_9GAMM rbh
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:EDN69023.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" so
ABC-type multidrug transport system, ATPase component
ar4r2_scaffold_1004_6
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4933..5670
DNA (738bp) protein (246aa)
ABC transporter, permease protein n=1 Tax=Beggiatoa sp. PS RepID=A7BWR0_9GAMM rbh
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:BAP55959.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1004_7
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5680..7650
DNA (1971bp) protein (657aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BXC7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EDN68808.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
ar4r2_scaffold_1004_8
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7668..8942
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CG41_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55957.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1004_9
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9274..10773
DNA (1500bp) protein (500aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00250216}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF
Apolipoprotein N-acyltransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CGH2_9GAMM rbh
apolipoprotein N-acyltransferase
ar4r2_scaffold_1004_10
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10774..12627)
DNA (1854bp) protein (618aa)
DNA mismatch repair protein MutL n=1 Tax=Beggiatoa alba B18LD RepID=I3CJF4_9GAMM rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae;
DNA mismatch repair protein MutL
ar4r2_scaffold_1004_11

Not on your lists

12801..13511
DNA (711bp) protein (237aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
thyX; thymidylate synthase, flavin-dependent (EC:2.1.1.148)
thymidylate synthase n=1 Tax=Thermus igniterrae RepID=UPI0003816F09
ar4r2_scaffold_1004_12
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13512..14114)
DNA (603bp) protein (201aa)
Chemotaxis protein CheC, inhibitor of MCP methylation n=1 Tax=Beggiatoa alba B18LD RepID=I3CKK8_9GAMM
Chemotaxis protein CheC, inhibitor of MCP methylation {ECO:0000313|EMBL:EIJ44151.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichace
chemotaxis protein CheC
ar4r2_scaffold_1004_13
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14121..14477)
DNA (357bp) protein (119aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Beggiatoa alba B18LD RepID=I3CKK9_9GAMM
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:BAP57135.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1004_14
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14758..15051
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82T27_NITEU
hypothetical protein; K09803 hypothetical protein Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
hypothetical protein
ar4r2_scaffold_1004_15
Alishewanella jeotgali, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15041..15271
DNA (231bp) protein (77aa)
CopG family transcripitonal regulator n=1 Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI000361F6C6
Uncharacterized protein {ECO:0000313|EMBL:EHR42525.1}; TaxID=1129374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella j
hypothetical protein
ar4r2_scaffold_1004_16
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15337..16785)
DNA (1449bp) protein (483aa)
Trk system potassium uptake protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CCQ2_9GAMM rbh
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa
TrkH family potassium uptake protein
ar4r2_scaffold_1004_17
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16913..18001
DNA (1089bp) protein (363aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Begg
Signal transduction histidine kinase, nitrogen specific n=1 Tax=Beggiatoa alba B18LD RepID=I3CC31_9GAMM rbh
signal transduction histidine kinase, nitrogen specific, NtrB
ar4r2_scaffold_1004_18
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18506..19360)
DNA (855bp) protein (285aa)
Alpha/beta hydrolase fold protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KFB2_CYAP7 rbh
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:BAP56961.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingri
ar4r2_scaffold_1004_19
Leptospira kirschneri, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19399..20493)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Leptospira interrogans RepID=UPI000346330E
Leucine rich repeat protein {ECO:0000313|EMBL:EPG48279.1}; TaxID=1049942 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kirschneri serovar Cynopteri s
lipoprotein
Displaying 19 items

View Taxonomy