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ar4r2_scaffold_1032

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1032_1
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..625
DNA (624bp) protein (208aa)
Helix-turn-helix domain protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QQ63_9CYAN
transposase IS605
Transposase IS605 {ECO:0000313|EMBL:BAP54457.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1032_2
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

773..1288
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BT53_9GAMM
Membrane protein {ECO:0000313|EMBL:KHD09503.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita n
outer membrane protein OmpH
ar4r2_scaffold_1032_3
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1310..2320
DNA (1011bp) protein (337aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotri
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Beggiatoa sp. PS RepID=A7BT52_9GAMM rbh
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
ar4r2_scaffold_1032_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2457..2906
DNA (450bp) protein (150aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Beggiatoa sp. PS RepID=A7BT51_9GAMM
(3R)-hydroxymyristoyl ACP dehydratase
ar4r2_scaffold_1032_5
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2879..3676
DNA (798bp) protein (266aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Beggiatoa sp. PS RepID=A7BT50_9GAMM rbh
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
ar4r2_scaffold_1032_6
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3710..4261
DNA (552bp) protein (184aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae;
Oligoribonuclease n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HB10_PSEAC
oligoribonuclease
ar4r2_scaffold_1032_7
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4401..6407)
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YCD3_THIV6 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFL74651.1}; Flags: Precursor;; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocy
ar4r2_scaffold_1032_8
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6689..7972
DNA (1284bp) protein (428aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Beggiatoa alba B18LD RepID=I3CGF1_9GAMM rbh
phosphopyruvate hydratase
ar4r2_scaffold_1032_9
unknown

Not on your lists

8830..9117
DNA (288bp) protein (96aa)

This feature has no annotations

ar4r2_scaffold_1032_10
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9142..9606
DNA (465bp) protein (155aa)
EVE domain-containing protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00037C5415
Uncharacterized protein {ECO:0000313|EMBL:EHQ51574.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothio
EVE domain-containing protein
ar4r2_scaffold_1032_11
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9617..10627
DNA (1011bp) protein (337aa)
SPFH domain-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CF17_9GAMM rbh
Membrane protease subunit, stomatin/prohibitin {ECO:0000313|EMBL:KHD06332.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" sour
SPFH domain-containing protein
ar4r2_scaffold_1032_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10702..11079
DNA (378bp) protein (126aa)
SmpA / OmlA family protein n=1 Tax=Beggiatoa sp. PS RepID=A7C6T6_9GAMM
SmpA/OmlA family protein
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="T
ar4r2_scaffold_1032_13
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11442..11909)
DNA (468bp) protein (156aa)
Hemerythrin-like metal-binding domain-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CD94_9GAMM
Hemerythrin-like metal-binding domain-containing protein {ECO:0000313|EMBL:EIJ41587.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;"
hemerythrin-like metal-binding protein
ar4r2_scaffold_1032_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12223..13329
DNA (1107bp) protein (369aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Beggiatoa sp. SS RepID=A7BKP5_9GAMM rbh
hypothetical protein
ar4r2_scaffold_1032_15
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13554..13769)
DNA (216bp) protein (72aa)
cold-shock protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003764E76
Cold-shock protein {ECO:0000313|EMBL:KJV07423.1}; TaxID=1632867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn10-6.;
cold-shock protein
ar4r2_scaffold_1032_16
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14064..14642
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000371734A
Uncharacterized protein {ECO:0000313|EMBL:EXJ17034.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp.
hypothetical protein
ar4r2_scaffold_1032_17
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14714..15178
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000371734A
Uncharacterized protein {ECO:0000313|EMBL:EAT04252.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
Protein of unknown function DUF820
ar4r2_scaffold_1032_18
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15500..16516)
DNA (1017bp) protein (339aa)
Glycosyl transferase, family 9 n=1 Tax=Beggiatoa sp. PS RepID=A7BYV7_9GAMM rbh
Glycosyl transferase, family 9 {ECO:0000313|EMBL:EDN68278.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.
glycosyl transferase, family 9
ar4r2_scaffold_1032_19
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17113..17817
DNA (705bp) protein (235aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57446.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1032_20
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17874..18494)
DNA (621bp) protein (207aa)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-R
Adenylyl-sulfate kinase n=1 Tax=Beggiatoa alba B18LD RepID=I3CDA0_9GAMM rbh
adenylylsulfate kinase
ar4r2_scaffold_1032_21
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18664..19773)
DNA (1110bp) protein (370aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 n=1 Tax=Beggiatoa sp. PS RepID=A7C2Z5_9GAMM rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 {ECO:0000313|EMBL:EDN66839.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" s
DAHP synthetase I/KDSA
ar4r2_scaffold_1032_22
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20220..21515
DNA (1296bp) protein (432aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiot
Citrate synthase n=1 Tax=Beggiatoa alba B18LD RepID=I3CIA6_9GAMM rbh
citrate synthase
ar4r2_scaffold_1032_23
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21644..23764
DNA (2121bp) protein (707aa)
Large exoprotein containing haemagglutination activity domain n=1 Tax=Beggiatoa sp. PS RepID=A7BQ07_9GAMM rbh
Large exoprotein containing haemagglutination activity domain {ECO:0000313|EMBL:EDN71381.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiat
large exoprotein containing haemagglutination activity domain
ar4r2_scaffold_1032_24
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23883..25106
DNA (1224bp) protein (408aa)
Aminotransferase, class I and II n=1 Tax=Beggiatoa sp. PS RepID=A7C1K7_9GAMM rbh
aminotransferase, class I and II
Aminotransferase, class I and II {ECO:0000313|EMBL:BAP55471.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingric
ar4r2_scaffold_1032_25
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25140..26654
DNA (1515bp) protein (505aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=40754 species="Bacteria; Proteobacteri
Threonine ammonia-lyase, biosynthetic, long form n=1 Tax=Beggiatoa alba B18LD RepID=U5FCD6_9GAMM rbh
threonine dehydratase
ar4r2_scaffold_1032_26
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26869..29799
DNA (2931bp) protein (977aa)
Putative Zn-dependent peptidase, insulinase n=1 Tax=Beggiatoa alba B18LD RepID=I3CI00_9GAMM rbh
Peptidase M16 {ECO:0000313|EMBL:BAP55985.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
peptidase M16
ar4r2_scaffold_1032_27
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29887..30606)
DNA (720bp) protein (240aa)
hypothetical protein, partial n=1 Tax=Methylobacter sp. UW 659-2-H10 RepID=UPI0003777327
hypothetical protein
Tax=BJP_IG2158_Methylococcales_50_91
ar4r2_scaffold_1032_28
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30714..30968)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C1R5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN67270.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
glutaredoxin 2
ar4r2_scaffold_1032_29
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30965..32395)
DNA (1431bp) protein (477aa)
Periplasmic serine protease, Do/DeqQ family n=1 Tax=Beggiatoa alba B18LD RepID=I3CCB8_9GAMM rbh
Periplasmic serine protease, Do/DeqQ family {ECO:0000313|EMBL:EIJ41261.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggia
periplasmic serine protease
ar4r2_scaffold_1032_30
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32458..32901)
DNA (444bp) protein (148aa)
Positive regulator of sigma E activity n=1 Tax=Beggiatoa alba B18LD RepID=I3CCB9_9GAMM
Positive regulator of sigma E activity {ECO:0000313|EMBL:EIJ41262.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa
positive regulator of sigma E, RseC/MucC
Displaying items 1-30 of 33 in total

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