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ar4r2_scaffold_1190

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1190_1
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1350
DNA (1350bp) protein (450aa)
Signal transduction histidine kinase n=1 Tax=Beggiatoa sp. PS RepID=A7BTU7_9GAMM
PAS domain-containing protein
PAS domain-containing protein {ECO:0000313|EMBL:BAP55692.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;
ar4r2_scaffold_1190_2
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1466..2428)
DNA (963bp) protein (321aa)
RNA polymerase sigma factor RpoS n=1 Tax=Beggiatoa alba B18LD RepID=I3CI43_9GAMM rbh
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=395493 species="Bacteria; Proteobacteri
RNA polymerase sigma factor RpoS
ar4r2_scaffold_1190_3
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2463..3284)
DNA (822bp) protein (274aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CI42_9GAMM
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:EIJ43285.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggi
peptigoglycan-binding protein LysM
ar4r2_scaffold_1190_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3427..4665)
DNA (1239bp) protein (413aa)
Putative glycosyl hydrolase n=1 Tax=Beggiatoa alba B18LD RepID=I3CI41_9GAMM rbh
putative glycosyl hydrolase rbh
Putative glycosyl hydrolase {ECO:0000313|EMBL:BAP56944.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1190_5
Moritella viscosa, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4942..5499)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI00036AD638
membrane protein
Membrane protein {ECO:0000313|EMBL:CED59740.1}; TaxID=80854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella viscosa.;"
ar4r2_scaffold_1190_6
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5593..6765)
DNA (1173bp) protein (391aa)
Sodium/hydrogen exchanger n=1 Tax=Beggiatoa sp. PS RepID=A7BXY3_9GAMM rbh
Sodium/hydrogen exchanger {ECO:0000313|EMBL:EDN68603.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
sodium/hydrogen antiporter
ar4r2_scaffold_1190_7
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6809..7687)
DNA (879bp) protein (293aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
Ribosomal protein L11 methyltransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CGQ6_9GAMM rbh
50S ribosomal protein L11 methyltransferase
ar4r2_scaffold_1190_8
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7700..8710)
DNA (1011bp) protein (337aa)
Peptidase M28 n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VJ69_9CYAN rbh
Aminopeptidase {ECO:0000313|EMBL:KHD10234.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nel
peptidase M28
ar4r2_scaffold_1190_9
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8714..9448)
DNA (735bp) protein (245aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256
tRNA/rRNA methyltransferase, SpoU n=1 Tax=Beggiatoa sp. PS RepID=A7BQM9_9GAMM
tRNA/rRNA methyltransferase, SpoU
ar4r2_scaffold_1190_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9572..12988)
DNA (3417bp) protein (1139aa)
MscS Mechanosensitive ion channel n=1 Tax=Beggiatoa sp. PS RepID=A7BUR5_9GAMM
MscS Mechanosensitive ion channel
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:BAP57644.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingri
ar4r2_scaffold_1190_11
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13094..14041)
DNA (948bp) protein (316aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase n=2 Tax=Beggiatoa alba B18LD RepID=I3CF43_9GAMM rbh
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:EIJ42236.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" sou
zinc-binding oxidoreductase rbh
ar4r2_scaffold_1190_12
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14132..14503)
DNA (372bp) protein (124aa)
Putative fluoride ion transporter CrcB n=1 Tax=Beggiatoa sp. PS RepID=A7BY01_9GAMM
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggi
camphor resistance CrcB protein
ar4r2_scaffold_1190_13
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14751..17369)
DNA (2619bp) protein (873aa)
Glycogen phosphorylase n=1 Tax=Beggiatoa sp. PS RepID=A7BVB8_9GAMM rbh
glycogen phosphorylase
Glycogen phosphorylase {ECO:0000313|EMBL:BAP54553.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1190_14
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17699..18448)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C5N2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN65902.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
ar4r2_scaffold_1190_15
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(18511..20073)
DNA (1563bp) protein (521aa)
DNA methylase N-4/N-6 domain-containing protein (EC:2.1.1.-)
hypothetical protein Faci_07171 id=2212669 bin=GWB2_Ignavibacteria_35_12 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
ar4r2_scaffold_1190_16
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20527..21543
DNA (1017bp) protein (339aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
ketol-acid reductoisomerase n=1 Tax=Lamprocystis purpurea RepID=UPI00036457A2 rbh
ketol-acid reductoisomerase rbh
ar4r2_scaffold_1190_17
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21595..22668
DNA (1074bp) protein (358aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
Chorismate synthase n=1 Tax=Beggiatoa sp. PS RepID=A7BUT4_9GAMM
chorismate synthase
ar4r2_scaffold_1190_18
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22913..23497
DNA (585bp) protein (195aa)
Fe-S-cluster-containing hydrogenase subunit n=1 Tax=Beggiatoa alba B18LD RepID=I3CCR4_9GAMM
Fe-S-cluster-containing hydrogenase subunit {ECO:0000313|EMBL:EIJ41407.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Begg
4Fe-4S ferredoxin
ar4r2_scaffold_1190_19
unknown

Not on your lists

23517..23717
DNA (201bp) protein (67aa)

This feature has no annotations

ar4r2_scaffold_1190_20
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23727..24659
DNA (933bp) protein (311aa)
Formate dehydrogenase, gamma subunit n=1 Tax=Beggiatoa alba B18LD RepID=I3CCR6_9GAMM
Formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:EIJ41409.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;"
formate dehydrogenase subunit gamma
Displaying 20 items

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