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ar4r2_scaffold_1408

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1408_1
unknown

Not on your lists

comp(204..302)
DNA (99bp) protein (33aa)

This feature has no annotations

ar4r2_scaffold_1408_2
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(299..2692)
DNA (2394bp) protein (798aa)
CRISPR-associated helicase, Cas3 family n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J1Y0_DESRM rbh
Putative CRISPR-associated helicase, Cas3 family {ECO:0000313|EMBL:CDH46486.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" s
CRISPR-associated helicase Cas3 rbh
ar4r2_scaffold_1408_3
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3017..3763)
DNA (747bp) protein (249aa)
CRISPR-associated protein, Cas5h family n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J1X9_DESRM
CRISPR-associated Cas5 family Hmari subtype protein
CRISPR-associated Cas5 family Hmari subtype protein {ECO:0000313|EMBL:BAP54870.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" sourc
ar4r2_scaffold_1408_4
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3773..4810)
DNA (1038bp) protein (346aa)
CRISPR-associated protein, Csh2 family n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J1X8_DESRM rbh
CRISPR-associated protein, Csh2 family {ECO:0000313|EMBL:CDH46484.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Can
CRISPR-associated Csh2 family protein
ar4r2_scaffold_1408_5
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4828..6900)
DNA (2073bp) protein (691aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J1X7_DESRM rbh
CRISPR-associated protein TM1802
CRISPR-associated protein TM1802 {ECO:0000313|EMBL:BAP54872.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingric
ar4r2_scaffold_1408_6
unknown

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comp(6881..7081)
DNA (201bp) protein (67aa)

This feature has no annotations

ar4r2_scaffold_1408_7
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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8127..10787
DNA (2661bp) protein (887aa)
Sensory box protein n=2 Tax=Lyngbya aestuarii BL J RepID=U7QKW1_9CYAN
PAS domain S-box {ECO:0000313|EMBL:BAP57239.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
PAS domain S-box
ar4r2_scaffold_1408_8
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10794..11987
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DFJ7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGW54488.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichonana (v
hypothetical protein
ar4r2_scaffold_1408_9
Phytophthora ramorum, Phytophthora, Peronosporales, Eukaryota

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comp(12136..13434)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Phytophthora ramorum RepID=H3GL01_PHYRM
Uncharacterized protein {ECO:0000313|EnsemblProtists:Phyra77004}; TaxID=164328 species="Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora.;" source="Phytophthora ramorum (Sudden oak de
surface protein from Gram-positive cocci
ar4r2_scaffold_1408_10
unknown

Not on your lists

comp(13497..15353)
DNA (1857bp) protein (619aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000360B71A
ar4r2_scaffold_1408_11
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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15571..15855
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C2L6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN66966.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
ar4r2_scaffold_1408_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15860..16009
DNA (150bp) protein (50aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW96051.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ar4r2_scaffold_1408_13
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16009..16212
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YH59_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX29903.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmen
hypothetical protein
ar4r2_scaffold_1408_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16216..16671
DNA (456bp) protein (152aa)
Putative transcription factor, MBF1 like protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GKW9_METAL
transcription factor, MBF1
Transcription factor, MBF1 {ECO:0000313|EMBL:BAP55108.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1408_15
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16928..17800)
DNA (873bp) protein (291aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichace
Parvulin-like peptidyl-prolyl isomerase n=1 Tax=Methylomicrobium album BG8 RepID=H8GMF5_METAL
PpiC-type peptidyl-prolyl cis-trans isomerase
ar4r2_scaffold_1408_16
unknown

Not on your lists

17820..17939
DNA (120bp) protein (40aa)

This feature has no annotations

ar4r2_scaffold_1408_17
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18093..22016)
DNA (3924bp) protein (1308aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUM1_NITHN rbh
Uncharacterized protein {ECO:0000313|EMBL:BAP55118.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
hypothetical protein
ar4r2_scaffold_1408_18
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21973..22683)
DNA (711bp) protein (237aa)
Putative arginyl-tRNA--protein transferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CGM5_9GAMM rbh
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:00002
arginyl-tRNA-protein arginylyltransferase
ar4r2_scaffold_1408_19
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22680..23402)
DNA (723bp) protein (241aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transf
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CGM6_9GAMM rbh
leucyl/phenylalanyl-tRNA--protein transferase
ar4r2_scaffold_1408_20
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23646..24122)
DNA (477bp) protein (159aa)
TPR repeat-containing protein n=2 Tax=Cyanothece RepID=B7K2E6_CYAP8
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ACK65282.1}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801)
Displaying 20 items

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