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ar4r2_scaffold_1658

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1658_1
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1152
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CES3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42116.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hyalin domain-containing protein
ar4r2_scaffold_1658_2
Drosophila grimshawi, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

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1230..1727
DNA (498bp) protein (166aa)
GH24137 {ECO:0000313|EMBL:EDV92271.1}; TaxID=7222 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroid
ar4r2_scaffold_1658_3
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1747..3129
DNA (1383bp) protein (461aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=40754 species="Bacteria
Phosphoglucosamine mutase n=1 Tax=Beggiatoa sp. PS RepID=A7BRF8_9GAMM rbh
phosphoglucosamine mutase
ar4r2_scaffold_1658_4
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3116..3739
DNA (624bp) protein (208aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Beggiatoa alba B18LD RepID=I3CC54_9GAMM
23S rRNA methylase
ar4r2_scaffold_1658_5
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3829..5232)
DNA (1404bp) protein (468aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1003181 species="Bacteria; P
Glutamate--tRNA ligase n=1 Tax=Beggiatoa sp. PS RepID=A7BZN8_9GAMM rbh
glutamyl-tRNA synthetase
ar4r2_scaffold_1658_6
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5299..5898)
DNA (600bp) protein (200aa)
Shikimate kinase n=1 Tax=Beggiatoa alba B18LD RepID=I3CGB0_9GAMM
Shikimate kinase {ECO:0000313|EMBL:EIJ42653.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
AAA ATPase
ar4r2_scaffold_1658_7
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5985..6812)
DNA (828bp) protein (276aa)
Sec-independent protein translocase protein TatC n=1 Tax=Beggiatoa alba B18LD RepID=I3CEK5_9GAMM rbh
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" sou
twin arginine targeting protein translocase subunit TatC
ar4r2_scaffold_1658_8
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6886..7209)
DNA (324bp) protein (108aa)
Sec-independent protein translocase protein TatB n=1 Tax=Beggiatoa sp. PS RepID=A7C757_9GAMM
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
twin arginine translocase protein TatB
ar4r2_scaffold_1658_9
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7215..7445)
DNA (231bp) protein (77aa)
Sec-independent protein translocase protein TatA n=1 Tax=Beggiatoa sp. PS RepID=A7C0P6_9GAMM
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;
tatA; Sec-independent protein secretion pathway components
ar4r2_scaffold_1658_10
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7464..7820)
DNA (357bp) protein (119aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Beggiatoa alba B18LD RepID=I3CEK8_9GAMM
HIT family hydrolase {ECO:0000313|EMBL:KHD03616.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargari
HIT family hydrolase
ar4r2_scaffold_1658_11
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7826..8143)
DNA (318bp) protein (106aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Beggiatoa alba B18LD RepID=I3CEK9_9GAMM
phosphoribosyl-ATP pyrophosphatase
ar4r2_scaffold_1658_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8147..8887)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E834C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57542.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1658_13
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8995..9702)
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C4X2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD09194.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
ar4r2_scaffold_1658_14
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9851..11686
DNA (1836bp) protein (612aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Beggiatoa sp. PS RepID=A7BXS0_9GAMM rbh
glucosamine--fructose-6-phosphate aminotransferase
ar4r2_scaffold_1658_15
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11924..12826)
DNA (903bp) protein (301aa)
N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Beggiatoa sp. PS RepID=A7BUV1_9GAMM rbh
N-acetylglucosaminylphosphatidylinositol deacetylase {ECO:0000313|EMBL:EDN69680.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" sou
Glycosyl transferase, group 2 family protein
ar4r2_scaffold_1658_16
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12883..13311
DNA (429bp) protein (143aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJZ5_9GAMM
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EIJ43938.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa al
ferric uptake regulator family protein
ar4r2_scaffold_1658_17
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13335..14258
DNA (924bp) protein (308aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Beggiatoa alba B18LD RepID=I3CI65_9GAMM rbh
glutathione ABC transporter permease
Glutathione ABC transporter permease {ECO:0000313|EMBL:BAP54979.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca in
ar4r2_scaffold_1658_18
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14269..15063
DNA (795bp) protein (265aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Beggiatoa sp. PS RepID=A7C2X8_9GAMM rbh
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:BAP54978.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiopl
ar4r2_scaffold_1658_19
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

16287..29915
DNA (13629bp) protein (4543aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AR72_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:BAN03690.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter cocc
hypothetical protein
Displaying 19 items

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