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ar4r2_scaffold_2010

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2010_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86..253
DNA (168bp) protein (56aa)
Transposase IS4 family protein n=2 Tax=Thiothrix nivea DSM 5205 RepID=I3BY03_9GAMM
Transposase IS4 family protein {ECO:0000313|EMBL:EIJ36246.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea D
transposase, IS4 family protein
ar4r2_scaffold_2010_2
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(360..2432)
DNA (2073bp) protein (691aa)
Cation transport ATPase n=1 Tax=Beggiatoa sp. PS RepID=A7BPP0_9GAMM rbh
Cation transport ATPase {ECO:0000313|EMBL:EDN71504.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
heavy metal translocating P-type ATPase
ar4r2_scaffold_2010_3
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2678..3640)
DNA (963bp) protein (321aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Beggiatoa alba B18LD RepID=I3CGX3_9GAMM rbh
3-oxoacyl-(acyl-carrier-protein) synthase III
ar4r2_scaffold_2010_4
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3637..4641)
DNA (1005bp) protein (335aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CGX2_9GAMM rbh
phosphate acyltransferase
ar4r2_scaffold_2010_5
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4673..4852)
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=1 Tax=Thioalkalivibrio RepID=UPI000372B40B
50S ribosomal protein L32 Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
rpmF; 50S ribosomal protein L32
ar4r2_scaffold_2010_6
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4891..5400)
DNA (510bp) protein (170aa)
Putative metal-binding protein, possibly nucleic-acid binding n=1 Tax=Beggiatoa alba B18LD RepID=I3CGX0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD12713.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
ar4r2_scaffold_2010_7

Not on your lists

5521..6114
DNA (594bp) protein (198aa)
Histone acetyltransferase HPA2 n=1 Tax=Methylophaga lonarensis MPL RepID=M7NXV5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN19358.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
ar4r2_scaffold_2010_8
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6145..6609
DNA (465bp) protein (155aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=GWD2_Desulfuromonadales_54_10_curated
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase id=1964507 bin=GWB2_Geobacter-like_52_12 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
ar4r2_scaffold_2010_9
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

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6665..7243
DNA (579bp) protein (193aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XT96_STAC7
Lysine exporter protein (LYSE/YGGA)
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:AFZ35301.1}; Flags: Precursor;; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain
ar4r2_scaffold_2010_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7275..7715
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CL79_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55359.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2010_11
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7736..8263
DNA (528bp) protein (176aa)
Thiol:disulfide interchange protein DsbE n=1 Tax=Beggiatoa sp. PS RepID=A7C616_9GAMM
disulfide interchange protein DsbE
Disulfide interchange protein DsbE {ECO:0000313|EMBL:BAP54372.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingr
ar4r2_scaffold_2010_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8270..8644
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C5Q9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57400.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2010_13
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8715..9515
DNA (801bp) protein (267aa)
ABC-type uncharacterized transport system, permease component n=1 Tax=Beggiatoa alba B18LD RepID=I3CCA2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD04734.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
ABC-type uncharacterized transport system, permease component
ar4r2_scaffold_2010_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9545..10051
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CEN2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP56090.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2010_15
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10056..11156
DNA (1101bp) protein (367aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotricha
Quinolinate synthase A n=1 Tax=Beggiatoa sp. PS RepID=A7C3B7_9GAMM rbh
quinolinate synthetase A
ar4r2_scaffold_2010_16
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11938..12744
DNA (807bp) protein (269aa)
Two component transcriptional regulator, AraC family n=1 Tax=Thiocapsa marina 5811 RepID=F9UE75_9GAMM
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAP57676.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2010_17
unknown

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12967..13779
DNA (813bp) protein (271aa)

This feature has no annotations

ar4r2_scaffold_2010_18
unknown

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comp(13898..14557)
DNA (660bp) protein (220aa)

This feature has no annotations

ar4r2_scaffold_2010_19
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14548..15048)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U963_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV19321.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina
hypothetical protein
ar4r2_scaffold_2010_20
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15171..15530
DNA (360bp) protein (120aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP58239.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Putative uncharacterized protein id=15192440 bin=GWC2_NOV_55_46 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
ar4r2_scaffold_2010_21
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15703..16929
DNA (1227bp) protein (409aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
Argininosuccinate synthase n=1 Tax=Beggiatoa alba B18LD RepID=I3CGZ9_9GAMM rbh
argininosuccinate synthase rbh
ar4r2_scaffold_2010_22
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17066..17773
DNA (708bp) protein (236aa)
Cell division protein ZipA n=1 Tax=Beggiatoa alba B18LD RepID=I3CKQ7_9GAMM
cell division protein ZipA
Cell division protein ZipA {ECO:0000256|RuleBase:RU003612}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2010_23
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17755..19758)
DNA (2004bp) protein (668aa)
Transglutaminase domain protein n=1 Tax=Beggiatoa sp. PS RepID=A7BZG7_9GAMM rbh
Transglutaminase domain protein {ECO:0000313|EMBL:EDN68067.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS
transglutaminase domain-containing protein
ar4r2_scaffold_2010_24
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19863..20438)
DNA (576bp) protein (192aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; T
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LJ47_9BACT
5-formyltetrahydrofolate cyclo-ligase
ar4r2_scaffold_2010_25
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20435..21040)
DNA (606bp) protein (202aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W3L2_DESIS
exonuclease RNase T and DNA polymerase III
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:BAP58112.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thiopl
ar4r2_scaffold_2010_26
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21040..22869)
DNA (1830bp) protein (610aa)
Putative signal-transduction protein containing cAMP-binding and CBS domains n=1 Tax=Beggiatoa alba B18LD RepID=I3CDL2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD08430.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
putative signal-transduction protein containing cAMP-binding and CBS domains
ar4r2_scaffold_2010_27
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22972..24651)
DNA (1680bp) protein (560aa)
SSS sodium solute transporter n=1 Tax=Beggiatoa alba B18LD RepID=I3CDL7_9GAMM rbh
SSS sodium solute transporter {ECO:0000313|EMBL:EIJ41710.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source=
cation/acetate symporter
ar4r2_scaffold_2010_28
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24654..24803)
DNA (150bp) protein (50aa)
Membrane protein containing DUF485 n=1 Tax=Beggiatoa sp. PS RepID=A7BU03_9GAMM
Membrane protein containing DUF485 {ECO:0000313|EMBL:EDN69976.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp.
membrane protein
Displaying 28 items

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