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ar4r2_scaffold_2185

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2185_1
unknown

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3..215
DNA (213bp) protein (71aa)

This feature has no annotations

ar4r2_scaffold_2185_2
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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306..2600
DNA (2295bp) protein (765aa)
Exporter of the RND superfamily n=1 Tax=Beggiatoa sp. PS RepID=A7BSN4_9GAMM rbh
RND transporter {ECO:0000313|EMBL:KHD12889.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita ne
hypothetical protein
ar4r2_scaffold_2185_3
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2597..3376
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BSE3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EDN70541.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
conserved hypothetical protein
ar4r2_scaffold_2185_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3481..3822)
DNA (342bp) protein (114aa)
Enolase n=1 Tax=Beggiatoa sp. PS RepID=A7BTH3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55408.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2185_5
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3917..6358)
DNA (2442bp) protein (814aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=40754 species="Bacteria; Proteoba
Leucine--tRNA ligase n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E368_9GAMM rbh
leucyl-tRNA synthetase rbh
ar4r2_scaffold_2185_6
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6729..7358)
DNA (630bp) protein (210aa)
Electron transport complex protein RnfG n=1 Tax=Beggiatoa sp. PS RepID=A7BUX6_9GAMM
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Ca
electron transport complex, RnfABCDGE type, G subunit
ar4r2_scaffold_2185_7
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7361..8386)
DNA (1026bp) protein (342aa)
Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Beggiatoa alba B18LD RepID=I3CGV5_9GAMM rbh
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Ca
electron transport complex, RnfABCDGE type, D subunit
ar4r2_scaffold_2185_8
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8707..9504)
DNA (798bp) protein (266aa)
Secreted protein n=1 Tax=Beggiatoa sp. PS RepID=A7BS50_9GAMM
secreted protein
Secreted protein {ECO:0000313|EMBL:BAP57621.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2185_9
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9534..11333)
DNA (1800bp) protein (600aa)
Poly(3-hydroxyalkanoate) synthetase n=1 Tax=Beggiatoa alba B18LD RepID=I3CDK2_9GAMM rbh
Poly(3-hydroxyalkanoate) synthetase {ECO:0000313|EMBL:EIJ41695.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa al
poly(3-hydroxyalkanoate) synthetase
ar4r2_scaffold_2185_10
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11594..12241)
DNA (648bp) protein (216aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-canonical
Non-canonical purine NTP pyrophosphatase n=1 Tax=Beggiatoa alba B18LD RepID=I3CIV3_9GAMM
NTP phosphatase
ar4r2_scaffold_2185_11
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12365..12910)
DNA (546bp) protein (182aa)
Lysine-arginine-ornithine-binding periplasmic protein n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SR62_RHOPH
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD09801.1}; Flags: Fragment;; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichacea
Lysine-arginine-ornithine-binding periplasmic protein
ar4r2_scaffold_2185_12
unknown

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comp(12958..13068)
DNA (111bp) protein (37aa)

This feature has no annotations

ar4r2_scaffold_2185_13
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13043..14155)
DNA (1113bp) protein (371aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=40754 species="Bacteria; Proteobacteria; Gammapr
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Beggiatoa alba B18LD RepID=I3CI79_9GAMM rbh
response regulator receiver protein
ar4r2_scaffold_2185_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14168..14794)
DNA (627bp) protein (209aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; T
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Beggiatoa alba B18LD RepID=I3CI80_9GAMM rbh
chemotaxis protein CheD
ar4r2_scaffold_2185_15
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14953..15789)
DNA (837bp) protein (279aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
Chemotaxis protein methyltransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CI81_9GAMM rbh
chemotaxis protein CheR rbh
ar4r2_scaffold_2185_16
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16108..18786)
DNA (2679bp) protein (893aa)
DNA mismatch repair protein MutS n=1 Tax=Beggiatoa alba B18LD RepID=I3CJC2_9GAMM rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; B
DNA mismatch repair protein MutS
ar4r2_scaffold_2185_17
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18786..19544)
DNA (759bp) protein (253aa)
Putative flavoprotein n=1 Tax=Beggiatoa alba B18LD RepID=I3CF07_9GAMM
Putative flavoprotein {ECO:0000313|EMBL:EIJ42200.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
beta-lactamase domain protein
ar4r2_scaffold_2185_18
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19621..20379)
DNA (759bp) protein (253aa)
Flavoprotein n=1 Tax=Beggiatoa sp. PS RepID=A7BWR8_9GAMM rbh
Flavoprotein {ECO:0000313|EMBL:EDN69016.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
flavoprotein
ar4r2_scaffold_2185_19
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20931..21362)
DNA (432bp) protein (144aa)
Bacterial type II secretion system protein n=1 Tax=Beggiatoa sp. PS RepID=A7C780_9GAMM
bacterial type II secretion system protein
Bacterial type II secretion system protein {ECO:0000313|EMBL:BAP56997.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thiopl
ar4r2_scaffold_2185_20
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21370..22926)
DNA (1557bp) protein (519aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BY66_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57785.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2185_21
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22989..24461)
DNA (1473bp) protein (491aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=40754 species="Bacter
glycogen synthase n=1 Tax=Mastigocladopsis repens RepID=UPI0002FB92D2 rbh
glycogen/starch synthase
ar4r2_scaffold_2185_22
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25318..29004
DNA (3687bp) protein (1229aa)
PAS domain S-box n=1 Tax=Beggiatoa alba B18LD RepID=I3CK28_9GAMM rbh
multi-sensor hybrid histidine kinase rbh
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:BAP56737.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca in
ar4r2_scaffold_2185_23
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29050..30492)
DNA (1443bp) protein (481aa)
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Beggiatoa alba B18LD RepID=I3CIA2_9GAMM rbh
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:EIJ43345.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotr
type II secretion system protein E
ar4r2_scaffold_2185_24
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30504..31061)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CIA3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ43346.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggi
ar4r2_scaffold_2185_25
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31066..31491)
DNA (426bp) protein (142aa)
General secretion pathway protein G n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6G5_DESAT
general secretion pathway protein G
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_2185_26
unknown

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comp(31488..31631)
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 26 items

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