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ar4r2_scaffold_2308

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2308_1
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..564
DNA (564bp) protein (188aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteob
Cysteine desulfurase n=1 Tax=Beggiatoa sp. PS RepID=A7BXG8_9GAMM
aminotransferase, class V
ar4r2_scaffold_2308_2
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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604..1023
DNA (420bp) protein (140aa)
FeS cluster assembly scaffold IscU n=1 Tax=Beggiatoa sp. PS RepID=A7BXG9_9GAMM
FeS cluster assembly scaffold IscU {ECO:0000313|EMBL:EDN68767.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp.
FeS cluster assembly scaffold IscU
ar4r2_scaffold_2308_3
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1162..3834)
DNA (2673bp) protein (891aa)
Cell surface protein n=1 Tax=Beggiatoa sp. PS RepID=A7C2M2_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP54963.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2308_4
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(4152..5732)
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034778DF rbh
Uncharacterized protein {ECO:0000313|EMBL:KIE09005.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
Peptidase S54, rhomboid domain-containing protein
ar4r2_scaffold_2308_5
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5812..6801
DNA (990bp) protein (330aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Beggiatoa sp. PS RepID=A7BZ16_9GAMM rbh
pyridoxal phosphate biosynthetic protein PdxA
ar4r2_scaffold_2308_6

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comp(6845..9214)
DNA (2370bp) protein (790aa)
Uncharacterized protein n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6WZ95_NITSE rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN83109.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
ar4r2_scaffold_2308_7
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9319..11181)
DNA (1863bp) protein (621aa)
Two-component hybrid sensor and regulator n=1 Tax=Beggiatoa sp. PS RepID=A7BQY7_9GAMM rbh
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:EDN71053.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggia
two-component hybrid sensor and regulator rbh
ar4r2_scaffold_2308_8
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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11253..11744
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0C7W6_ALCDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT68605.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dies
ar4r2_scaffold_2308_9
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12141..14288)
DNA (2148bp) protein (716aa)
TonB-dependent receptor n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0Z8_NITHN
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADE14555.1}; Flags: Precursor;; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nit
ar4r2_scaffold_2308_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15030..15335
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C7H2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55686.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2308_11
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15351..17165
DNA (1815bp) protein (605aa)
ABC-type oligopeptide transport system, periplasmic component n=1 Tax=Beggiatoa alba B18LD RepID=I3CG57_9GAMM rbh
peptide ABC transporter substrate-binding protein rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAP55687.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source=
ar4r2_scaffold_2308_12
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17168..17962
DNA (795bp) protein (265aa)
RND family efflux transporter, MFP subunit n=1 Tax=Beggiatoa alba B18LD RepID=I3CHL9_9GAMM
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EIJ43112.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiat
cation efflux system
ar4r2_scaffold_2308_13
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17973..18428
DNA (456bp) protein (152aa)
Hydrogenase maturation protease n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA85_9PROT
HoxW protein
HoxW protein {ECO:0000313|EMBL:BAP57561.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2308_14
unknown

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comp(18744..18968)
DNA (225bp) protein (75aa)

This feature has no annotations

ar4r2_scaffold_2308_15
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19111..20103
DNA (993bp) protein (331aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_012
Cyclic pyranopterin monophosphate synthase n=1 Tax=Beggiatoa alba B18LD RepID=I3CKU1_9GAMM rbh
moaA; molybdenum cofactor biosynthesis protein A
ar4r2_scaffold_2308_16
unknown

Not on your lists

20534..21172
DNA (639bp) protein (213aa)
hypothetical protein
ar4r2_scaffold_2308_17
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21388..21735
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZC4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDI03900.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
hypothetical protein
ar4r2_scaffold_2308_18
unknown

Not on your lists

comp(22150..22257)
DNA (108bp) protein (36aa)

This feature has no annotations

ar4r2_scaffold_2308_19
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22506..22892
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) RepID=Q55JX8_CRYNB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57556.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Displaying 19 items

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