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ar4r2_scaffold_2459

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2459_1
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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269..1618
DNA (1350bp) protein (450aa)
Two-component hybrid sensor and regulator n=1 Tax=Beggiatoa sp. PS RepID=A7BTK2_9GAMM
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:BAP55814.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ing
ar4r2_scaffold_2459_2
unknown

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comp(1627..1878)
DNA (252bp) protein (84aa)

This feature has no annotations

ar4r2_scaffold_2459_3
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1875..3584)
DNA (1710bp) protein (570aa)
heat shock protein Hsp70 n=1 Tax=Methylobacter marinus RepID=UPI00036CCB69 rbh
Heat shock protein Hsp70 {ECO:0000313|EMBL:KHD07198.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomar
heat shock protein 70
ar4r2_scaffold_2459_4
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3581..4246)
DNA (666bp) protein (222aa)
GrpE protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWE4_NITHN
Uncharacterized protein {ECO:0000313|EMBL:KHD07199.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
GrpE protein
ar4r2_scaffold_2459_5
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4239..4550)
DNA (312bp) protein (104aa)
Heat shock protein DnaJ protein n=1 Tax=uncultured bacterium RepID=K1ZIH2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KHD07200.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
heat shock protein DnaJ domain-containing protein
ar4r2_scaffold_2459_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4642..5958)
DNA (1317bp) protein (439aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B66FA6 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE76485.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
DctM (C4-dicarboxylate permease, large subunit)
ar4r2_scaffold_2459_7
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5991..6494)
DNA (504bp) protein (168aa)
DctQ (C4-dicarboxylate permease, small subunit) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQ84_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KJR64201.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum th
DctQ (C4-dicarboxylate permease, small subunit)
ar4r2_scaffold_2459_8
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6508..7560)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 RepID=S6K2K6_VIBNA rbh
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKH21947.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola s
TRAP-type C4-dicarboxylate transporter periplasmic protein
ar4r2_scaffold_2459_9
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7642..8652)
DNA (1011bp) protein (337aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S8E5_HAHCH rbh
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJS38497.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" s
TRAP-type C4-dicarboxylate transporter periplasmic protein
ar4r2_scaffold_2459_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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9260..9844
DNA (585bp) protein (195aa)
Putative cache sensor protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPQ4_ACCPU
cache domain protein
Cache domain protein {ECO:0000313|EMBL:BAP57478.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2459_11
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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10209..11369
DNA (1161bp) protein (387aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Beggiatoa alba B18LD RepID=I3CDW6_9GAMM rbh
ar4r2_scaffold_2459_12
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11442..12752
DNA (1311bp) protein (437aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Beggiatoa sp. PS RepID=A7BWL7_9GAMM rbh
S-adenosylhomocysteine hydrolase
ar4r2_scaffold_2459_13
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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12813..13094
DNA (282bp) protein (94aa)
Protein RnfH 1 n=1 Tax=Beggiatoa alba B18LD RepID=I3CCA8_9GAMM
UPF0125 protein BegalDRAFT_0331 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa al
electron transport complex, H subunit
Displaying 13 items

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