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ar4r2_scaffold_2926

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2926_1
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74..292)
DNA (219bp) protein (73aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57337.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2926_2
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(364..1281)
DNA (918bp) protein (306aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Beggiatoa alba B18LD RepID=I3CBK7_9GAMM
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EIJ41000.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
response regulator receiver protein
ar4r2_scaffold_2926_3
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1675..3102)
DNA (1428bp) protein (476aa)
Pilus retraction protein PilT n=1 Tax=Beggiatoa alba B18LD RepID=I3CCG9_9GAMM rbh
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:BAP54955.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2926_4
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3158..3589)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00037931A1
DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase
DNA-(Apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase {ECO:0000313|EMBL:ADE10577.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallione
ar4r2_scaffold_2926_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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3829..4392
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GIZ8_METAL
Uncharacterized protein {ECO:0000313|EMBL:CDH46589.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
hypothetical protein
ar4r2_scaffold_2926_6
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4414..5337
DNA (924bp) protein (308aa)
Type II secretion system protein K n=1 Tax=Beggiatoa alba B18LD RepID=I3CJX0_9GAMM
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candid
type II secretory pathway, component PulK
ar4r2_scaffold_2926_7
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5347..6231
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C3D2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN66701.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
ar4r2_scaffold_2926_8
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6273..6722
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI000363E5EB
Uncharacterized protein {ECO:0000313|EMBL:KHD06796.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
ar4r2_scaffold_2926_9
unknown

Not on your lists

comp(7243..7419)
DNA (177bp) protein (59aa)

This feature has no annotations

ar4r2_scaffold_2926_10
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7741..7938)
DNA (198bp) protein (66aa)
Transmembrane protein n=1 Tax=Beggiatoa sp. PS RepID=A7C4J5_9GAMM
Transmembrane protein {ECO:0000313|EMBL:EDN66289.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
ar4r2_scaffold_2926_11
unknown

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comp(7995..8252)
DNA (258bp) protein (86aa)

This feature has no annotations

ar4r2_scaffold_2926_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8555..8956
DNA (402bp) protein (134aa)
phosphate-starvation-inducible E n=1 Tax=Thiobacillus thioparus RepID=UPI000363F7BF
phosphate-starvation-inducible E
Phosphate-starvation-inducible E {ECO:0000313|EMBL:BAP56816.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingric
ar4r2_scaffold_2926_13
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8975..10387
DNA (1413bp) protein (471aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=40754 species="Bacteria; Pro
Glutamate--tRNA ligase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYC6_NITHN
glutamyl-tRNA synthetase
ar4r2_scaffold_2926_14
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10629..12392
DNA (1764bp) protein (588aa)
Membrane-fusion protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CBL5_9GAMM rbh
Membrane-fusion protein {ECO:0000313|EMBL:EIJ41008.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
membrane-fusion protein
ar4r2_scaffold_2926_15
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12398..13339)
DNA (942bp) protein (314aa)
Transcriptional regulator n=1 Tax=Beggiatoa alba B18LD RepID=I3CDN9_9GAMM rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KHD09266.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candi
RuBisCO operon transcriptional regulator rbh
ar4r2_scaffold_2926_16
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13578..14345)
DNA (768bp) protein (256aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073131}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073130};; 16S rR
Ribosomal RNA small subunit methyltransferase J n=1 Tax=Beggiatoa alba B18LD RepID=I3CKD2_9GAMM
methyltransferase
ar4r2_scaffold_2926_17
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14317..14766)
DNA (450bp) protein (150aa)
Outer membrane lipoprotein n=1 Tax=Beggiatoa alba B18LD RepID=I3CKD3_9GAMM
Outer membrane lipoprotein {ECO:0000313|EMBL:EIJ44076.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Be
slyB; 17 kda surface antigen
ar4r2_scaffold_2926_18
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14887..15630
DNA (744bp) protein (248aa)
Membrane protein, TerC family n=2 Tax=Geobacter metallireducens RepID=Q39UR1_GEOMG rbh
TerC family membrane protein
Membrane protein, TerC family {ECO:0000313|EMBL:ABB32013.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter met
ar4r2_scaffold_2926_19
unknown

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comp(15889..16569)
DNA (681bp) protein (227aa)

This feature has no annotations

ar4r2_scaffold_2926_20
unknown

Not on your lists

comp(16738..16938)
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying 20 items

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