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ar4r2_scaffold_2954

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2954_1
unknown

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2..241
DNA (240bp) protein (80aa)

This feature has no annotations

ar4r2_scaffold_2954_2
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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448..1185
DNA (738bp) protein (246aa)
Cytochrome c assembly protein n=1 Tax=Beggiatoa sp. PS RepID=A7C5V8_9GAMM rbh
Heme ABC transporter permease {ECO:0000313|EMBL:KHD11528.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Th
ccmC; heme exporter protein CcmC
ar4r2_scaffold_2954_3
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1315..2037
DNA (723bp) protein (241aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Beggiatoa sp. PS RepID=A7C580_9GAMM rbh
ar4r2_scaffold_2954_trna_1
unknown

Not on your lists

comp(2047..2134)
DNA (88bp)
transferRNA
ar4r2_scaffold_2954_4
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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2386..3210
DNA (825bp) protein (275aa)
Negative regulator of beta-lactamase expression n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EX39_9CYAN
Negative regulator of beta-lactamase expression {ECO:0000313|EMBL:EKV00492.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngb
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
ar4r2_scaffold_2954_5
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3456..5447
DNA (1992bp) protein (664aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI000379310A rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KHD11523.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thioma
short-chain dehydrogenase
ar4r2_scaffold_2954_6
unknown

Not on your lists

comp(5692..5841)
DNA (150bp) protein (50aa)

This feature has no annotations

ar4r2_scaffold_2954_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5863..7059)
DNA (1197bp) protein (399aa)
Aminotransferase, class V:Aromatic amino acid beta-eliminating lyase/threonine aldolase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FW7_DECAR
aminotransferase class V
Aminotransferase, class V:Aromatic amino acid beta-eliminating lyase/threonine aldolase {ECO:0000313|EMBL:AAZ46264.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales
ar4r2_scaffold_2954_8
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7081..7965)
DNA (885bp) protein (295aa)
Nitrogen fixation protein NifU n=1 Tax=Beggiatoa alba B18LD RepID=I3CJS6_9GAMM rbh
Nitrogen fixation protein NifU {ECO:0000256|PIRNR:PIRNR000375}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba
Fe-S cluster assembly protein NifU
ar4r2_scaffold_2954_9
unknown

Not on your lists

7981..8148
DNA (168bp) protein (56aa)

This feature has no annotations

ar4r2_scaffold_2954_10
unknown

Not on your lists

8120..8299
DNA (180bp) protein (60aa)

This feature has no annotations

ar4r2_scaffold_2954_11
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8664..10346
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4F0_NITHN rbh
Nitroreductase {ECO:0000313|EMBL:KHD04349.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nel
hypothetical protein
ar4r2_scaffold_2954_12
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10494..13313)
DNA (2820bp) protein (940aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI00031CCED1 rbh
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AFZ19030.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
ar4r2_scaffold_2954_13
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13459..14562
DNA (1104bp) protein (368aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
Queuine tRNA-ribosyltransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CC06_9GAMM rbh
queuine tRNA-ribosyltransferase
Displaying 14 items

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