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ar4r2_scaffold_656

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_656_1
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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476..5044
DNA (4569bp) protein (1523aa)
glutamate synthase n=1 Tax=Methylococcus capsulatus RepID=UPI00035C5F25 rbh
glutamate synthase
Glutamate synthase {ECO:0000313|EMBL:BAP58025.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_656_2
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(5161..6141)
DNA (981bp) protein (327aa)
DNA methylase N-4/N-6 domain-containing protein; K07319 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00038045F0
DNA methylase N-4/N-6 domain-containing protein
ar4r2_scaffold_656_3
R_RIF_OP11_01_40_20, RIF-OP11-1, Microgenomates, Bacteria

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comp(6138..7106)
DNA (969bp) protein (323aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_01_40_20_curated
Putative uncharacterized protein id=4536930 bin=GWF2_Ignavibacteria_35_20 species=Capnocytophaga sp. oral taxon 326 genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
ar4r2_scaffold_656_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7386..8000)
DNA (615bp) protein (205aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CCQ4_9GAMM
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:BAP57064.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae
ar4r2_scaffold_656_5
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8216..8860)
DNA (645bp) protein (215aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
Endonuclease III n=1 Tax=Beggiatoa alba B18LD RepID=I3CGK3_9GAMM rbh
endonuclease III
ar4r2_scaffold_656_6
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8976..10094)
DNA (1119bp) protein (373aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1003181 species="Bacte
DNA polymerase III subunit beta n=1 Tax=Beggiatoa sp. PS RepID=A7C334_9GAMM rbh
DNA polymerase III, beta chain
ar4r2_scaffold_656_7
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10137..12026)
DNA (1890bp) protein (630aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxI
Biosynthetic arginine decarboxylase n=1 Tax=Beggiatoa alba B18LD RepID=U5FCD9_9GAMM rbh
arginine decarboxylase
ar4r2_scaffold_656_8
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12089..12877)
DNA (789bp) protein (263aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Beggiatoa sp. PS RepID=A7BW52_9GAMM rbh
DNA-(Apurinic or apyrimidinic site) lyase {ECO:0000313|EMBL:KHD10812.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="C
endonuclease/exonuclease/phosphatase
ar4r2_scaffold_656_9
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12891..15593)
DNA (2703bp) protein (901aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1Y4_9BACT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55346.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_656_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15596..16042)
DNA (447bp) protein (149aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55345.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_656_11
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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16610..23896
DNA (7287bp) protein (2429aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BT48_9GAMM rbh
Conserved repeat protein {ECO:0000313|EMBL:BAP54557.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
conserved repeat protein
ar4r2_scaffold_656_12
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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24010..24297
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CBL4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ41007.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ar4r2_scaffold_656_13
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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24609..27293
DNA (2685bp) protein (895aa)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Beggiatoa alba B18LD RepID=I3CBF0_9GAMM rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
UTP-GlnB uridylyltransferase, GlnD rbh
ar4r2_scaffold_656_14
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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27533..27832
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BY00_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD06958.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
Displaying 14 items

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