ggKbase home page

ar4r2_scaffold_786

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_786_1
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1735)
DNA (1734bp) protein (578aa)
UvrABC system protein B n=1 Tax=Beggiatoa alba B18LD RepID=I3CHH9_9GAMM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
ar4r2_scaffold_786_2
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1758..4145)
DNA (2388bp) protein (796aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XYT5_STAC7 rbh
exonuclease RNase T and DNA polymerase III rbh
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:BAP55232.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thiopl
ar4r2_scaffold_786_3
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4330..6495
DNA (2166bp) protein (722aa)
TonB-dependent receptor n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0Z8_NITHN
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADE14555.1}; Flags: Precursor;; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nit
ar4r2_scaffold_786_4
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6602..8158)
DNA (1557bp) protein (519aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS domain S-box n=1 Tax=Beggiatoa alba B18LD RepID=I3CFS9_9GAMM rbh
PAS domain S-box {ECO:0000313|EMBL:EIJ42472.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ar4r2_scaffold_786_5
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8148..10379)
DNA (2232bp) protein (744aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; T
Signal transduction histidine kinase n=1 Tax=Beggiatoa alba B18LD RepID=I3CFT0_9GAMM rbh
multi-sensor hybrid histidine kinase
ar4r2_scaffold_786_6
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10403..10984)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CF33_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42226.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggi
hypothetical protein
ar4r2_scaffold_786_7
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

11311..12816
DNA (1506bp) protein (502aa)
Glycosyl transferase group 1 n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TXB8_9CYAN
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AFY86806.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
ar4r2_scaffold_786_8
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

12779..16072
DNA (3294bp) protein (1098aa)
Putative glycosyltransferase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T033_9CYAN
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AFY75526.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
ar4r2_scaffold_786_9
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16510..16980
DNA (471bp) protein (157aa)
CheW protein n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DAU3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD08063.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
ar4r2_scaffold_786_10
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16999..17319
DNA (321bp) protein (107aa)
Sulfur/thiosulfate oxidation protein SoxZ n=1 Tax=Beggiatoa sp. PS RepID=A7BZ97_9GAMM
Sulfur/thiosulfate oxidation protein SoxZ {ECO:0000313|EMBL:EDN68139.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggia
sulfur/thiosulfate oxidation protein SoxZ
ar4r2_scaffold_786_11
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17483..21586)
DNA (4104bp) protein (1368aa)
glycosyl transferase family 2 n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B7A687 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDH44085.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
glycosyl transferase
ar4r2_scaffold_786_12
R_Chlamydiae_49_11, Chlamydiae, Bacteria

Not on your lists

21589..23073
DNA (1485bp) protein (495aa)
WsaE n=1 Tax=Geobacillus stearothermophilus RepID=Q7BG51_GEOSE
glycosyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Chlamydiae_49_11_curated
ar4r2_scaffold_786_13
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23085..25163
DNA (2079bp) protein (693aa)
protease n=1 Tax=Nevskia ramosa RepID=UPI0003B37DFC
Extracellular matrix protein FRAS1 {ECO:0000313|EMBL:GAM10204.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobact
Na-Ca exchanger/integrin-beta4
ar4r2_scaffold_786_14
unknown

Not on your lists

25126..25245
DNA (120bp) protein (40aa)

This feature has no annotations

ar4r2_scaffold_786_15
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25260..27308
DNA (2049bp) protein (683aa)
protease n=1 Tax=Nevskia ramosa RepID=UPI0003B37DFC
Uncharacterized protein {ECO:0000313|EMBL:KHD03937.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
ar4r2_scaffold_786_16
unknown

Not on your lists

27271..27387
DNA (117bp) protein (39aa)

This feature has no annotations

ar4r2_scaffold_786_17
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27479..27991)
DNA (513bp) protein (171aa)
Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Beggiatoa alba B18LD RepID=I3CJM2_9GAMM
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:EIJ43815.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Be
polyhydroxyalkonate synthesis repressor, PhaR
ar4r2_scaffold_786_18
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28093..29271)
DNA (1179bp) protein (393aa)
Acetyl-CoA acetyltransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CJM3_9GAMM rbh
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:BAP55136.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_786_19
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29563..30564)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CGE3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42686.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggi
hypothetical protein
ar4r2_scaffold_786_20
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30894..32471
DNA (1578bp) protein (526aa)
YD repeat-containing protein id=12498182 bin=THIO_MID species=Kiloniella laminariae genus=Kiloniella taxon_order=Kiloniellales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KGE85503.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylib
RHS Repeat family protein
ar4r2_scaffold_786_21
Candidatus Glomeribacter gigasporarum, Candidatus Glomeribacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32518..33468
DNA (951bp) protein (317aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1070319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae;
DNA methylase N-4/N-6 domain protein n=1 Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2JBD7_9BURK rbh
DNA modification methylase
ar4r2_scaffold_786_22
Candidatus Glomeribacter gigasporarum, Candidatus Glomeribacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33465..34040
DNA (576bp) protein (192aa)
Restriction endonuclease BglII n=1 Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2JBD8_9BURK
Restriction endonuclease BglII {ECO:0000313|EMBL:CCD30092.1}; TaxID=1070319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Candidatus Glomeribacter.;" source
Restriction endonuclease BglII
ar4r2_scaffold_786_23
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34056..35435
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SKQ0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD94777.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
exported hypothetical protein
ar4r2_scaffold_786_24
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(35483..36016)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y8D8_THIV6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF73556.1}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy
hypothetical protein
Displaying 24 items

View Taxonomy