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ar4r2_scaffold_973

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_973_1
unknown

Not on your lists

comp(1..96)
DNA (96bp) protein (32aa)

This feature has no annotations

ar4r2_scaffold_973_2
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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205..1005
DNA (801bp) protein (267aa)
CRISPR-associated protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJV2_9GAMM
CRISPR-associated protein {ECO:0000313|EMBL:EIJ43895.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;
cold-shock DNA-binding protein family protein
ar4r2_scaffold_973_3
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1009..2439
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJV0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ43893.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_973_4
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2420..4207
DNA (1788bp) protein (596aa)
RAMP superfamily protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJU9_9GAMM rbh
RAMP superfamily protein {ECO:0000313|EMBL:EIJ43892.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_973_5
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4197..5648
DNA (1452bp) protein (484aa)
Putative RAMP superfamily protein probably involved in DNA repair n=1 Tax=Beggiatoa alba B18LD RepID=I3CJU8_9GAMM
Putative RAMP superfamily protein probably involved in DNA repair {ECO:0000313|EMBL:EIJ43891.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beg
CRISPR-associated RAMP protein
ar4r2_scaffold_973_6
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5935..7215)
DNA (1281bp) protein (427aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=195253 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" so
Signal transduction histidine kinase n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RUX1_SYNP3
signal transduction histidine kinase
ar4r2_scaffold_973_7
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7537..9465
DNA (1929bp) protein (643aa)
Chaperone protein HtpG n=1 Tax=Beggiatoa sp. PS RepID=A7BZG6_9GAMM rbh
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:M
Heat shock protein Hsp90
ar4r2_scaffold_973_8
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9573..10874)
DNA (1302bp) protein (434aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Beggiatoa alba B18LD RepID=I3CGW5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD08318.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
type I restriction enzyme StySPI M protein
ar4r2_scaffold_973_9
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

Not on your lists

11068..11604
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A1P2_PELCD
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
hypothetical protein
ar4r2_scaffold_973_10
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

Not on your lists

11594..12199
DNA (606bp) protein (202aa)
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
Putative uncharacterized protein id=3747154 bin=GWF2_Bacteroidetes_33_38 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
ar4r2_scaffold_973_11
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12300..12806)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CEP8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42091.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_973_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12922..14091)
DNA (1170bp) protein (390aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thi
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Beggiatoa sp. PS RepID=A7C3B1_9GAMM rbh
ribonucleotide-diphosphate reductase subunit beta
ar4r2_scaffold_973_13
GWF2_CPR3_35_18, CPR3, Bacteria

Not on your lists

14979..16835
DNA (1857bp) protein (619aa)
phosphoribosyl-ATP pyrophosphohydrolase, partial id=3914572 bin=GWF2_CPR3_35_18 species=endosymbiont of Bathymodiolus sp. genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_CPR3_35_18 organism_group=CPR3
phosphoribosyl-ATP pyrophosphohydrolase, partial Tax=GWF2_CPR3_35_18
ar4r2_scaffold_973_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17173..19164
DNA (1992bp) protein (664aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca
Transketolase n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T0K3_META2 rbh
transketolase
ar4r2_scaffold_973_15
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19210..20220
DNA (1011bp) protein (337aa)
gap; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococca
Glyceraldehyde 3-phosphate dehydrogenase n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q604E7_METCA rbh
ar4r2_scaffold_973_16
unknown

Not on your lists

20405..21175
DNA (771bp) protein (257aa)

This feature has no annotations

ar4r2_scaffold_973_17
unknown

Not on your lists

comp(21202..21393)
DNA (192bp) protein (64aa)

This feature has no annotations

ar4r2_scaffold_973_18
unknown

Not on your lists

comp(21418..21603)
DNA (186bp) protein (62aa)

This feature has no annotations

ar4r2_scaffold_973_19
unknown

Not on your lists

comp(21590..21727)
DNA (138bp) protein (46aa)

This feature has no annotations

ar4r2_scaffold_973_20
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21724..22560)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6HEE2_9GAMM
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAP55967.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_973_21
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22735..22899
DNA (165bp) protein (55aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" s
Cytosine-specific methyltransferase n=1 Tax=Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) RepID=C7M932_CAPOD
DNA-cytosine methyltransferase
Displaying 21 items

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