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ar4r2_scaffold_1512_24

Organism: ALUMROCK_MS4_Beggiotoa_37_524

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(23244..24167)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 315.0
  • Bit_score: 418
  • Evalue 8.40e-114
Shikimate dehydrogenase n=1 Tax=Beggiatoa sp. PS RepID=A7BU55_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 319.0
  • Bit_score: 416
  • Evalue 3.00e-113
  • rbh
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 315.0
  • Bit_score: 418
  • Evalue 1.70e-114

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Taxonomy

Thioploca ingrica → Thioploca → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGTCTCAGCTTGATCACTATGCAGTAATGGGTAATCCTATTGCACACAGTAAATCGCCTTTTATTCACACATTATTCGCTCAACAAACAGCCCAATCTTTAGAATATCAAGCAATTTTAGTTGATACAACTCCCGGTAAATTTGAACAAGCAGTAGTCAATTTTCAAGCAACTGGTGGTAAAGGGTTAAATGTGACTGTGCCTTTTAAACAAGCAGCTTATGCTTTAGCGATTAGACGTACTGCTCGTGCTGAAAAAGCGGGTGCTGTAAATACTTTATGGTTTGATGAACAAGGTAATTGTCAAGGTGATAATACTGATGGAATTGGTTTAGTACGTGATTTAACTCAAAATTATCAAGGAAATATAGCTGGAAAACGGTTACTTATTTTAGGTGCTGGAGGTGCTGTCAGAGGTGTTTTAAGCCCTTTATTACAAGCACAACCACAATTATGTGTTATTGCCAATCGTACTGTGAATAAAGCTGAAGAATTAGCTCAATTATTTAGAGATGAAGGTCATATTACTGCTTGTGGTTATCATGAATTAGTAGGACAACAATTTGATTTAATTATTAATGGAACATCGGCTAGTCTACAAGGCGATTTACCACCATTACCTGACAATTTATTAACAACAGCAGGTTGGTGCTATGATATGGCTTATGGCAATGCTCCTACTCCCTTTGTGCGTTGGGCAGAAACTCAACAAGCAGCTATGGCATTGGATGGATTAGGAATGTTAGTAGAACAAGCGGCAGAAGCATTTTATTTGTGGCGTGGCATTTTTCCAAATACTACACCAGTTATACAACAACTAAGGACTCAGCTAAATCCATCACCGACAGAATTAGGTGGTCCCCAAGGTTTAGAGCCTACTCGTTATGGAGATTGGGAACGAAAAGGACGTTGTATTGATTTTTGA
PROTEIN sequence
Length: 308
MSQLDHYAVMGNPIAHSKSPFIHTLFAQQTAQSLEYQAILVDTTPGKFEQAVVNFQATGGKGLNVTVPFKQAAYALAIRRTARAEKAGAVNTLWFDEQGNCQGDNTDGIGLVRDLTQNYQGNIAGKRLLILGAGGAVRGVLSPLLQAQPQLCVIANRTVNKAEELAQLFRDEGHITACGYHELVGQQFDLIINGTSASLQGDLPPLPDNLLTTAGWCYDMAYGNAPTPFVRWAETQQAAMALDGLGMLVEQAAEAFYLWRGIFPNTTPVIQQLRTQLNPSPTELGGPQGLEPTRYGDWERKGRCIDF*