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ar4r2_scaffold_1512

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1512_1
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1287
DNA (1287bp) protein (429aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Begg
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Beggiatoa sp. PS RepID=A7BPT0_9GAMM
histidine kinase
ar4r2_scaffold_1512_2
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1303..3072
DNA (1770bp) protein (590aa)
Two-component hybrid sensor and regulator n=1 Tax=Beggiatoa sp. PS RepID=A7BU56_9GAMM rbh
sensor histidine kinase/response regulator
Sensor histidine kinase/response regulator {ECO:0000313|EMBL:BAP57340.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thiopl
ar4r2_scaffold_1512_3
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3216..4379
DNA (1164bp) protein (388aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Beggiatoa alba B18LD RepID=I3CES8_9GAMM rbh
succinyl-CoA synthetase subunit beta rbh
ar4r2_scaffold_1512_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4381..5256
DNA (876bp) protein (292aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotr
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Beggiatoa alba B18LD RepID=I3CES9_9GAMM
succinyl-CoA synthetase subunit alpha
ar4r2_scaffold_1512_5
unknown

Not on your lists

5366..5596
DNA (231bp) protein (77aa)

This feature has no annotations

ar4r2_scaffold_1512_6
Arthrospira sp. PCC 8005, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5591..5872)
DNA (282bp) protein (94aa)
Putative nucleotidyltransferase {ECO:0000313|EMBL:CCE18922.1}; EC=2.7.7.- {ECO:0000313|EMBL:CCE18922.1};; TaxID=376219 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthros
DNA polymerase n=1 Tax=Spirulina subsalsa RepID=UPI0002E6F638
hypothetical protein
ar4r2_scaffold_1512_7
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6257..7414)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000363B9DC
Uncharacterized protein {ECO:0000313|EMBL:KGE89052.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylib
similar to ankyrin 2,3/unc44
ar4r2_scaffold_1512_8
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7693..8097
DNA (405bp) protein (135aa)
Putative transcription factor, MBF1 like protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GL69_METAL
Putative transcription factor, MBF1 like protein {ECO:0000313|EMBL:EIC28068.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium
transcription factor, MBF1
ar4r2_scaffold_1512_9
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8111..8590)
DNA (480bp) protein (160aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-R
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CKA5_9GAMM
RNA methyltransferase
ar4r2_scaffold_1512_10
unknown

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comp(9422..9589)
DNA (168bp) protein (56aa)

This feature has no annotations

ar4r2_scaffold_1512_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9767..9934)
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ27085.1}; Flags: Fragment;; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
ar4r2_scaffold_1512_12
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10345..10833)
DNA (489bp) protein (163aa)
Homing endonuclease, LAGLIDADG family, 23S rRNA group I intron n=6 Tax=Coxiella burnetii RepID=A9NAI3_COXBR
Endonuclease {ECO:0000313|EMBL:KHD04553.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelso
homing endonuclease/LAGLIDADG family 23S rRNA group I intron
ar4r2_scaffold_1512_trna_2
unknown

Not on your lists

comp(13252..13324)
DNA (73bp)
transferRNA
ar4r2_scaffold_1512_trna_1
unknown

Not on your lists

comp(13387..13460)
DNA (74bp)
transferRNA
ar4r2_scaffold_1512_16S_1
unknown

Not on your lists

comp(13525..15057)
DNA (1533bp)
ar4r2_scaffold_1512_13
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15673..16977)
DNA (1305bp) protein (435aa)
M16 peptidase family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BPT3_9GAMM rbh
Zinc protease {ECO:0000313|EMBL:KHD06615.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nels
peptidase M16 family protein
ar4r2_scaffold_1512_14
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16977..18362)
DNA (1386bp) protein (462aa)
Putative Zn-dependent peptidase n=1 Tax=Beggiatoa alba B18LD RepID=I3CI29_9GAMM
Peptidase M16 {ECO:0000313|EMBL:KHD06622.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nels
peptidase M16
ar4r2_scaffold_1512_15
unknown

Not on your lists

18690..18926
DNA (237bp) protein (79aa)

This feature has no annotations

ar4r2_scaffold_1512_16
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18938..19357
DNA (420bp) protein (140aa)
PilT protein-like n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NL89_9DELT
Twitching motility protein PilT {ECO:0000313|EMBL:KHD05828.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus
PilT domain-containing protein
ar4r2_scaffold_1512_17
unknown

Not on your lists

19429..19656
DNA (228bp) protein (76aa)

This feature has no annotations

ar4r2_scaffold_1512_18
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19646..20035
DNA (390bp) protein (130aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WPX7_9CYAN
nucleic acid-binding protein, contains PIN domain
ar4r2_scaffold_1512_19
unknown

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20076..20333
DNA (258bp) protein (86aa)

This feature has no annotations

ar4r2_scaffold_1512_20
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20330..20533
DNA (204bp) protein (68aa)
PilT protein-like protein n=1 Tax=Microcystis aeruginosa PCC 9443 RepID=I4G3V6_MICAE
PilT protein-like protein {ECO:0000313|EMBL:CCI02617.1}; TaxID=1160281 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9443.;"
PilT protein domain protein
ar4r2_scaffold_1512_21
unknown

Not on your lists

20512..20685
DNA (174bp) protein (58aa)

This feature has no annotations

ar4r2_scaffold_1512_22
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20774..22447)
DNA (1674bp) protein (558aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CKF3_9GAMM rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:BAP55318.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae;
ar4r2_scaffold_1512_23
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22485..22928)
DNA (444bp) protein (148aa)
PAS domain S-box n=1 Tax=Beggiatoa alba B18LD RepID=I3CK28_9GAMM
PAS domain S-box {ECO:0000313|EMBL:EIJ43971.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa al
signal transduction histidine kinase
ar4r2_scaffold_1512_24
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23244..24167)
DNA (924bp) protein (308aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
Shikimate dehydrogenase n=1 Tax=Beggiatoa sp. PS RepID=A7BU55_9GAMM rbh
shikimate 5-dehydrogenase
ar4r2_scaffold_1512_25
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24245..25102
DNA (858bp) protein (286aa)
D-alanine aminotransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CC01_9GAMM rbh
D-amino-acid transaminase
D-amino-acid transaminase {ECO:0000313|EMBL:BAP57807.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1512_26
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25184..26818
DNA (1635bp) protein (545aa)
phosphoglucomutase n=1 Tax=Mastigocladopsis repens RepID=UPI0002EC14B1
phosphoglucomutase rbh
Phosphoglucomutase {ECO:0000313|EMBL:BAP55608.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1512_27
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26903..27652
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMD0_9GAMM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM49292.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" sou
Displaying items 1-30 of 40 in total

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