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ar4r2_scaffold_3259

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_3259_1
unknown

Not on your lists

comp(2..190)
DNA (189bp) protein (63aa)

This feature has no annotations

ar4r2_scaffold_3259_2
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

659..1888
DNA (1230bp) protein (410aa)
Multi-sensor hybrid histidine kinase n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SN37_9CHLR rbh
multi-sensor hybrid histidine kinase Tax=CG_Deferri_01
putative two-component hybrid sensor and regulator
ar4r2_scaffold_3259_3
unknown

Not on your lists

comp(1825..2427)
DNA (603bp) protein (201aa)

This feature has no annotations

ar4r2_scaffold_3259_4
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2509..3735)
DNA (1227bp) protein (409aa)
General secretion pathway protein GspF {ECO:0000313|EMBL:KGO33499.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source
General secretion pathway protein F id=2297302 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
general secretion pathway protein F
ar4r2_scaffold_3259_5
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3944..5188
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037D5488
peptidoglycan-binding domain 1 protein; K02450 general secretion pathway protein A Tax=GWB2_Desulfobacterales_56_26_curated
peptidoglycan-binding domain 1
ar4r2_scaffold_3259_6
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5695..6504
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037152ED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO78478.1}; TaxID=322710 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinela
ar4r2_scaffold_3259_7
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6518..7804
DNA (1287bp) protein (429aa)
chromate transporter, chromate ion transporter (CHR) family; K07240 chromate transporter Tax=RBG_16_Planctomycetes_64_12_curated
chromate transporter, chromate ion transporter (CHR) family; K07240 chromate transporter id=14624368 bin=bin5_DeltaP species=Thermodesulfobacterium thermophilum genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
chromate ion transporter family chromate transporter
ar4r2_scaffold_3259_8
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8165..8806)
DNA (642bp) protein (214aa)
Selenium metabolism protein YedF n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P0P8_DESSD
selenium metabolism protein YedF
Selenium metabolism protein YedF {ECO:0000313|EMBL:AGF77083.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desul
ar4r2_scaffold_3259_9
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9011..9919
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LNI4_SYNFM
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABK18986.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;"
ar4r2_scaffold_3259_10
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9930..11537)
DNA (1608bp) protein (536aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
Dihydroxy-acid dehydratase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PBF0_DESSD
dihydroxy-acid dehydratase
ar4r2_scaffold_3259_11
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11805..12974
DNA (1170bp) protein (390aa)
Pilus retraction protein PilT n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PKT2_DESSD rbh
pilus retraction protein PilT
Pilus retraction protein PilT {ECO:0000313|EMBL:AGF77086.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfoc
ar4r2_scaffold_3259_12
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13371..14078
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P5Y0_DESSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF77087.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa s
ar4r2_scaffold_3259_13
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14119..15507
DNA (1389bp) protein (463aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NY94_9DELT
short chain dehydrogenase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
class II aldolase/adducin family protein
ar4r2_scaffold_3259_14
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15498..16133
DNA (636bp) protein (212aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NY94_9DELT
short chain dehydrogenase Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
class II aldolase/adducin family protein
ar4r2_scaffold_3259_15
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

Not on your lists

comp(16142..16573)
DNA (432bp) protein (144aa)
AIG2 family protein id=4661597 bin=GWF2_Geobacter_54_21 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=BJP_IG2103_ACD39_50_23
ar4r2_scaffold_3259_16
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16570..17412)
DNA (843bp) protein (281aa)
Contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIX15300.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source
ADA regulatory protein id=3781637 bin=GWA2_Deltaproteo_65_63 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
methylated-DNA--protein-cysteine methyltransferase
ar4r2_scaffold_3259_17
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17648..18070
DNA (423bp) protein (141aa)
Rhodanese-related sulfurtransferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NCQ4_DESSD
Rhodanese-related sulfurtransferase
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:AGF77519.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfo
ar4r2_scaffold_3259_18
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18318..18743
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7UKT3_DESML
Uncharacterized protein {ECO:0000313|EMBL:EPR34459.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococc
hypothetical protein
ar4r2_scaffold_3259_19
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18736..18930
DNA (195bp) protein (65aa)
RNA-binding protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B64BDC
hypothetical protein Tax=CG_Desulfarul_01
RNA-binding protein
ar4r2_scaffold_3259_20
unknown

Not on your lists

comp(19570..19872)
DNA (303bp) protein (101aa)

This feature has no annotations

ar4r2_scaffold_3259_21
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19965..20918
DNA (954bp) protein (318aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055236};; ADP-L-glycero
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Azoarcus sp. KH32C RepID=H0PRV9_9RHOO
wcaG_rfaD; ADP-l-glycero-D-manno-heptose-6-epimerase
ar4r2_scaffold_3259_22
unknown

Not on your lists

21200..21808
DNA (609bp) protein (203aa)

This feature has no annotations

ar4r2_scaffold_3259_23
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21846..22157
DNA (312bp) protein (104aa)
Ni-dependent carbon monoxide dehydrogenase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PTL5_DESSD
Ni-dependent carbon monoxide dehydrogenase precursor Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
Ni-dependent carbon monoxide dehydrogenase precursor
ar4r2_scaffold_3259_24
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22350..22997
DNA (648bp) protein (216aa)
TonB-dependent receptor, plug n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ANF4_PELPD
TonB-dependent receptor, plug
TonB-dependent receptor, plug {ECO:0000313|EMBL:ABK98874.1}; Flags: Precursor;; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;"
ar4r2_scaffold_3259_25
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23032..24324
DNA (1293bp) protein (431aa)
TonB-dependent receptor, plug n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ANF4_PELPD
TonB-dependent receptor, plug
TonB-dependent receptor, plug {ECO:0000313|EMBL:ABK98874.1}; Flags: Precursor;; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;"
Displaying 25 items

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