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ar4r2_scaffold_1962

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1962_1
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..177
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PTK2_DESSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF79676.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa s
ar4r2_scaffold_1962_2
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(377..1339)
DNA (963bp) protein (321aa)
DHHA2 domain protein; K15986 manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Inorganic pyrophosphatase/exopolyphosphatase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PDK8_DESSD
inorganic pyrophosphatase/exopolyphosphatase
ar4r2_scaffold_1962_3
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1651..2550
DNA (900bp) protein (300aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1YMU6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJR96805.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
hypothetical protein
ar4r2_scaffold_1962_4
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2570..3571
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YRX6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO35060.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
TIGR00266 family protein
ar4r2_scaffold_1962_5
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3637..4353)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RHU2_DESPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW18436.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
ar4r2_scaffold_1962_6
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4446..4979)
DNA (534bp) protein (178aa)
Micrococcal nuclease-like nuclease n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PTD4_DESSD
micrococcal nuclease-like nuclease
Micrococcal nuclease-like nuclease {ECO:0000313|EMBL:AGF79591.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfoc
ar4r2_scaffold_1962_7
unknown

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comp(5294..5668)
DNA (375bp) protein (125aa)

This feature has no annotations

ar4r2_scaffold_1962_8
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5700..6053
DNA (354bp) protein (118aa)
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7Z5_DESSD
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator {ECO:0000313|EMBL:AGF79593.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobac
ar4r2_scaffold_1962_9
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6013..6669
DNA (657bp) protein (219aa)
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7Z5_DESSD
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator {ECO:0000313|EMBL:AGF79593.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobac
ar4r2_scaffold_1962_10
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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6793..8001
DNA (1209bp) protein (403aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XL8_RHOFD rbh
major facilitator transporter Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
major facilitator transporter
ar4r2_scaffold_1962_11
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7991..9304)
DNA (1314bp) protein (438aa)
Putative C4 dicarboxylate tripartite ATP-independent periplasmic (TRAP) transporter, permease component n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L1T0_BORA1 rbh
C4 dicarboxylate tripartite ATP-independent periplasmic (TRAP) transporter, permease
Putative C4 dicarboxylate tripartite ATP-independent periplasmic (TRAP) transporter, permease component {ECO:0000313|EMBL:CAJ49188.1}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteri
ar4r2_scaffold_1962_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9304..9843)
DNA (540bp) protein (180aa)
TRAP transporter, small subunit id=1314854 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TRAP transporter, small subunit Tax=GWE1_Thiobacillus_62_9_curated
TRAP-type mannitol/chloroaromatic compound transport system, small permease component
ar4r2_scaffold_1962_13
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10036..11139)
DNA (1104bp) protein (368aa)
ABC transporter substrate-binding protein n=1 Tax=beta proteobacterium L13 RepID=UPI000380159F
transporter, periplasmic component Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
dctP; TRAP dicarboxylate transporter subunit DctP
ar4r2_scaffold_1962_trna_2
unknown

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comp(11574..11647)
DNA (74bp)
transferRNA
ar4r2_scaffold_1962_14
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11746..12108)
DNA (363bp) protein (121aa)
Putative transcriptional regulator n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PJY8_DESSD
putative transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KGO33362.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
ar4r2_scaffold_1962_15
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12140..12430)
DNA (291bp) protein (97aa)
Bacterial nucleoid DNA-binding protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NJV5_DESSD
bacterial nucleoid DNA-binding protein
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:AGF79864.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source=
ar4r2_scaffold_1962_16
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12432..14876)
DNA (2445bp) protein (815aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
phenylalanyl-tRNA synthetase, beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P8R0_DESSD rbh
ar4r2_scaffold_1962_17

Not on your lists


comp(15083..16114)
DNA (1032bp) protein (344aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=uncultured bacterium RepID=K1YT53_9BACT
ar4r2_scaffold_1962_18
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16227..16583)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=RL20_DESPS
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;"
rplT; 50S ribosomal protein L20
ar4r2_scaffold_1962_19
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16696..16893)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PJY1_DESSD
LSU ribosomal protein L35P
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; D
ar4r2_scaffold_1962_20
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17045..17635)
DNA (591bp) protein (197aa)
Translation initiation factor IF-3 n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4IP87_9DELT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environm
translation initiation factor 3 (bIF-3)
ar4r2_scaffold_1962_21
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17701..19608)
DNA (1908bp) protein (636aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P8Q4_DESSD
ar4r2_scaffold_1962_trna_1
unknown

Not on your lists

comp(19959..20030)
DNA (72bp)
transferRNA
ar4r2_scaffold_1962_22
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20163..20765)
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PE49_DESSD rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae;
DNA replication and repair protein RecR
ar4r2_scaffold_1962_23
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20779..21099)
DNA (321bp) protein (107aa)
Nucleoid-associated protein UWK_03337 n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PU44_DESSD
Nucleoid-associated protein VR65_15150 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobu
DNA-binding protein, YbaB/EbfC family
ar4r2_scaffold_1962_24
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21133..23001)
DNA (1869bp) protein (623aa)
DNA polymerase III, subunit gamma/tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma/tau {ECO:0000313|EMBL:AGF79855.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AGF79855.1};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales;
DNA polymerase III, subunit gamma/tau n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PJX3_DESSD
ar4r2_scaffold_1962_25
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23590..25263
DNA (1674bp) protein (558aa)
Putative Kef-type K+ transport system, membrane component n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QE31_DESAH rbh
putative Kef-type K+ transport system, membrane component
Putative Kef-type K+ transport system, membrane component {ECO:0000313|EMBL:ACN17452.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Des
ar4r2_scaffold_1962_26
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25440..25901)
DNA (462bp) protein (154aa)
Glycosyl transferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P118_DESSD
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AGF77223.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source
ar4r2_scaffold_1962_27
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25951..26253)
DNA (303bp) protein (101aa)
glycosyl transferase Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
Glycosyl transferase family 2 id=1968990 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
glycosyl transferase
Displaying 29 items

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