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ar4r2_scaffold_2258

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2258_1
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..554
DNA (552bp) protein (184aa)
Putative uncharacterized protein id=2048479 bin=GWB2_Desulfobacterales_56_26 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein; K08988 putative membrane protein Tax=GWB2_Desulfobacterales_56_26_curated
hypothetical protein
ar4r2_scaffold_2258_2
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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822..1103
DNA (282bp) protein (94aa)
Transcriptional regulator, AsnC family n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RG91_DESPD
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADW18266.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source=
ar4r2_scaffold_2258_3
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1431..2438
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z348_9BACT rbh
filamentation induced by cAMP protein Fic Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
filamentation induced by cAMP protein Fic rbh
ar4r2_scaffold_2258_4
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

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2435..2728
DNA (294bp) protein (98aa)
hypothetical protein Tax=CG_Delta_06
BRO family protein id=3552259 bin=GWC1_CPR2_39_9 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
hypothetical protein
ar4r2_scaffold_2258_5
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3018..3359
DNA (342bp) protein (114aa)
Prevent-host-death family protein id=2259571 bin=GWB2_Geobacter-like_52_12 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
transcriptional regulator Tax=GWB2_Geobacteraceae_52_12_curated
transcriptional regulator
ar4r2_scaffold_2258_6
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3394..3663
DNA (270bp) protein (90aa)
Type I restriction-modification system, DNA adenine N6-methyltransferase subunit n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E9S0_GEOBB
type I restriction/modification system N-6 DNA methyltransferase
Type I restriction-modification system, DNA adenine N6-methyltransferase subunit {ECO:0000313|EMBL:ACH40244.2}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales;
ar4r2_scaffold_2258_7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3660..4703
DNA (1044bp) protein (348aa)
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein id=12552373 bin=BDI species=Desulfovibrio alkalitolerans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein
ar4r2_scaffold_2258_8
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4703..5272
DNA (570bp) protein (190aa)
c n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B3485E
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
ar4r2_scaffold_2258_9
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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5269..5472
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T256_META2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE22482.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicro
ar4r2_scaffold_2258_10
unknown

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comp(5437..5721)
DNA (285bp) protein (95aa)

This feature has no annotations

ar4r2_scaffold_2258_11
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5836..8841
DNA (3006bp) protein (1002aa)
DNA helicase/exodeoxyribonuclease V, gamma subunit (EC:3.1.11.5)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD sub
DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P5P7_DESSD
ar4r2_scaffold_2258_12
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8838..12671
DNA (3834bp) protein (1278aa)
DNA helicase/exodeoxyribonuclease V, beta subunit (EC:3.1.11.5)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD sub
DNA helicase/exodeoxyribonuclease V, beta subunit n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PKI5_DESSD
ar4r2_scaffold_2258_13
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12664..14526
DNA (1863bp) protein (621aa)
recD; exodeoxyribonuclease V subunit alpha; K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] Tax=GWB2_Desulfobacterales_56_26_curated
DNA helicase/exodeoxyribonuclease V, alpha subunit (EC:3.1.11.5)
Exodeoxyribonuclease V alpha chain id=2115784 bin=GWB2_Desulfobacterales_56_26 species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
ar4r2_scaffold_2258_14
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14737..15837
DNA (1101bp) protein (367aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y7S3_THIV6 rbh
response regulator containing a CheY-like receiver domain and an HD-GYP domain rbh
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:AFL73041.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromat
ar4r2_scaffold_2258_15
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15925..16656
DNA (732bp) protein (244aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
signal transduction histidine kinase, nitrogen specific, NtrB Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
PAS/PAC sensor hybrid histidine kinase id=2114146 bin=GWB2_Desulfobacterales_56_26 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Displaying 15 items

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