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ar4r2_scaffold_2909

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2909_1
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..1285
DNA (1284bp) protein (428aa)
type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit {ECO:0000313|EMBL:AGF79382.1}; EC=5.99.1.3 {ECO:0000313|EMBL:AGF79382.1};; TaxID=1167006 species="Bacteria; Proteobacteria; Del
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PCP4_DESSD
ar4r2_scaffold_2909_2
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1771..2427)
DNA (657bp) protein (219aa)
PHP domain protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDC7_DESPD rbh
PHP domain protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
PHP domain-containing protein
ar4r2_scaffold_2909_3
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2545..2805)
DNA (261bp) protein (87aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NIL3_DESSD
tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
ar4r2_scaffold_2909_4
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2802..3515)
DNA (714bp) protein (238aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NIL3_DESSD
tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
ar4r2_scaffold_2909_5

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comp(3499..3831)
DNA (333bp) protein (111aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=uncultured bacterium RepID=K1YEH7_9BACT
tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
ar4r2_scaffold_2909_6
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4161..5519)
DNA (1359bp) protein (453aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PSW8_DESSD
adenylosuccinate lyase
ar4r2_scaffold_2909_7
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5959..7779)
DNA (1821bp) protein (607aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7H0_DESSD
Uncharacterized protein {ECO:0000313|EMBL:KGO35093.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
single-stranded-DNA-specific exonuclease RecJ
ar4r2_scaffold_2909_8
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7978..8919)
DNA (942bp) protein (314aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA dimethylallyltransferase id=1960277 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
tRNA delta-2-isopentenylpyrophosphate transferase (TrpX)
ar4r2_scaffold_2909_9
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8916..9401)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDC1_DESPD
hypothetical protein; K02237 competence protein ComEA Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
hypothetical protein
ar4r2_scaffold_2909_10
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9379..10977)
DNA (1599bp) protein (533aa)
(R)-citramalate synthase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PSX3_DESSD
(R)-citramalate synthase
(R)-citramalate synthase {ECO:0000313|EMBL:AGF79416.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa
ar4r2_scaffold_2909_11
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11061..12302)
DNA (1242bp) protein (414aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; D
Aspartokinase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PCT5_DESSD
ar4r2_scaffold_2909_12
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12808..14538)
DNA (1731bp) protein (577aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LFZ8_SYNFM rbh
integral membrane sensor signal transduction histidine kinase Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
integral membrane sensor signal transduction histidine kinase
ar4r2_scaffold_2909_13
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14718..14945)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YQG2_9BACT
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
hypothetical protein
ar4r2_scaffold_2909_14
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14932..16218)
DNA (1287bp) protein (429aa)
PAS modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RFZ4_DESPD rbh
PAS modulated Fis family sigma-54 specific transcriptional regulator Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
PAS modulated Fis family sigma-54 specific transcriptional regulator
ar4r2_scaffold_2909_15
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16608..17006
DNA (399bp) protein (133aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
ar4r2_scaffold_2909_16
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17048..17590
DNA (543bp) protein (181aa)
sigma-54 dependent DNA-binding response regulator FrgC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
ar4r2_scaffold_2909_17
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17618..18025
DNA (408bp) protein (136aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CBY4_DESTA
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Displaying 17 items

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