ggKbase home page

ar4r2_scaffold_801

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_801_1
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(240..1571)
DNA (1332bp) protein (444aa)
Outer membrane protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7G9_DESSD
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGF77642.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" sour
ar4r2_scaffold_801_2
unknown

Not on your lists

1734..1997
DNA (264bp) protein (88aa)

This feature has no annotations

ar4r2_scaffold_801_3

Not on your lists

2463..3050
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YBM5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD40195.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
OmpA/MotB domain-containing protein
ar4r2_scaffold_801_4
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3144..3860)
DNA (717bp) protein (239aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7H5_DESSD
cytidylate kinase
ar4r2_scaffold_801_5
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3820..4932)
DNA (1113bp) protein (371aa)
histidinol phosphate aminotransferase apoenzyme (EC:2.6.1.9)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
Histidinol-phosphate aminotransferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P2D8_DESSD rbh
ar4r2_scaffold_801_6
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4991..6451)
DNA (1461bp) protein (487aa)
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=116700
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1ND14_DESSD
ar4r2_scaffold_801_7
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6626..6910)
DNA (285bp) protein (95aa)
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PD14_DESSD
ar4r2_scaffold_801_8
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6942..8012)
DNA (1071bp) protein (357aa)
Putative domain HDIG-containing protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PMH9_DESSD
Chemotaxis protein CheY {ECO:0000313|EMBL:KGO33550.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
putative domain HDIG-containing protein
ar4r2_scaffold_801_9
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8058..9122)
DNA (1065bp) protein (355aa)
Deacetylase, histone deacetylase/acetoin utilization protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7I0_DESSD
deacetylase, histone deacetylase/acetoin utilization protein
Deacetylase, histone deacetylase/acetoin utilization protein {ECO:0000313|EMBL:AGF77652.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; D
ar4r2_scaffold_801_10
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9146..9730)
DNA (585bp) protein (195aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobactera
5,10-methenyltetrahydrofolate synthetase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P2E2_DESSD
5,10-methenyltetrahydrofolate synthetase
ar4r2_scaffold_801_11
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9819..11063)
DNA (1245bp) protein (415aa)
Putative uncharacterized protein id=1726908 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
YeeE/YedE family protein (DUF395) Tax=GWB2_Desulfobacterales_56_26_curated
YeeE/YedE family protein (DUF395)
ar4r2_scaffold_801_12
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11404..11661
DNA (258bp) protein (86aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PD16_DESSD
putative redox protein, regulator of disulfide bond formation
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:AGF77655.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae;
ar4r2_scaffold_801_13
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11705..12037
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RH53_DESPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW19413.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
ar4r2_scaffold_801_14

Not on your lists

12051..12407
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D8F3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD89883.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ar4r2_scaffold_801_15

Not on your lists

12426..12599
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DSY1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD89884.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ar4r2_scaffold_801_16

Not on your lists

13334..14464
DNA (1131bp) protein (377aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=77133 species="Bacteri
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=uncultured bacterium RepID=K2CVY2_9BACT
ar4r2_scaffold_801_17
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14548..16962
DNA (2415bp) protein (805aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1167006 species="Bacteria; P
DNA gyrase subunit B n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PMI9_DESSD
ar4r2_scaffold_801_18
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17067..19559
DNA (2493bp) protein (831aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfo
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7I8_DESSD
ar4r2_scaffold_801_19
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19516..20568
DNA (1053bp) protein (351aa)
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P2F0_DESSD rbh
ar4r2_scaffold_801_20
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20581..21252)
DNA (672bp) protein (224aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PD23_DESSD
non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
ar4r2_scaffold_801_21
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21261..21812)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PMJ4_DESSD
hypothetical protein; K09765 hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
ar4r2_scaffold_801_22
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21809..23368)
DNA (1560bp) protein (520aa)
Related to nitrogen fixation protein (AnfA) n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AQD5_DESPS
nitrogen fixation protein (AnfA)
Related to nitrogen fixation protein (AnfA) {ECO:0000313|EMBL:CAG35438.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" sou
ar4r2_scaffold_801_trna_1
unknown

Not on your lists

23561..23643
DNA (83bp)
transferRNA
ar4r2_scaffold_801_trna_2
unknown

Not on your lists

23655..23743
DNA (89bp)
transferRNA
ar4r2_scaffold_801_23
unknown

Not on your lists

comp(23707..23850)
DNA (144bp) protein (48aa)

This feature has no annotations

ar4r2_scaffold_801_24
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23798..24286)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P2F4_DESSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF77668.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" sou
ar4r2_scaffold_801_25

Not on your lists

comp(24313..24723)
DNA (411bp) protein (137aa)
4Fe-4S ferredoxin iron-sulfur binding protein n=1 Tax=uncultured bacterium RepID=K1YVE7_9BACT
4Fe-4S ferredoxin iron-sulfur binding protein {ECO:0000313|EMBL:EKD41102.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Displaying 27 items

View Taxonomy