ggKbase home page

ar4r2_scaffold_1729

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1729_1
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..579
DNA (579bp) protein (193aa)
Type I restriction-modification system specificity determinant n=1 Tax=Arcobacter butzleri (strain RM4018) RepID=A8EVJ0_ARCB4
hsdS; Type I restriction-modification system specificity determinant
Type I restriction-modification system specificity determinant {ECO:0000313|EMBL:ABV67963.1}; TaxID=367737 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacterace
ar4r2_scaffold_1729_2
Sulfurovum sp. AR, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(631..1680)
DNA (1050bp) protein (350aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Sulfurovum sp. AR RepID=I2K669_9PROT rbh
ar4r2_scaffold_1729_3
Sulfurovum sp. AR, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1680..2195)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Sulfurovum sp. AR RepID=I2K670_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EIF50722.1}; TaxID=1165841 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AR.;"
hypothetical protein
ar4r2_scaffold_1729_4
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2195..3232)
DNA (1038bp) protein (346aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QAQ6_SULNB rbh
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:M
ar4r2_scaffold_1729_5
Sulfurovum lithotrophicum, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3234..5741)
DNA (2508bp) protein (836aa)
DNA gyrase subunit A n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QAQ7_SULNB
DNA gyrase subunit A {ECO:0000313|EMBL:AKF24601.1}; TaxID=206403 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum lithotrophicum.;"
gyrA; DNA gyrase subunit A
ar4r2_scaffold_1729_6
Sulfurovum sp. AR, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

5971..6417
DNA (447bp) protein (149aa)
Biopolymer ExbB/TolQ family transporter n=1 Tax=Sulfurovum sp. AR RepID=I2K673_9PROT
Biopolymer ExbB/TolQ family transporter {ECO:0000313|EMBL:EIF50725.1}; TaxID=1165841 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AR.;"
biopolymer ExbB/TolQ family transporter
ar4r2_scaffold_1729_7
Sulfurovum lithotrophicum, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

6455..6832
DNA (378bp) protein (126aa)
Biopolymer transport protein, ExbD/TolR family n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QAQ9_SULNB
Biopolymer transporter ExbD {ECO:0000313|EMBL:AKF24600.1}; TaxID=206403 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum lithotrophicum.;"
biopolymer ExbD/TolR family transporter
ar4r2_scaffold_1729_8
Sulfurovum lithotrophicum, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6836..7153)
DNA (318bp) protein (106aa)
Thioredoxin n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QAR0_SULNB
Thioredoxin {ECO:0000313|EMBL:AKF24599.1}; TaxID=206403 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum lithotrophicum.;"
thioredoxin
ar4r2_scaffold_1729_9
unknown

Not on your lists

7221..7352
DNA (132bp) protein (44aa)

This feature has no annotations

ar4r2_scaffold_1729_10
Sulfurospirillum deleyianum, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7437..7697)
DNA (261bp) protein (87aa)
Prevent-host-death family protein n=1 Tax=Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) RepID=D1B4L0_SULD5
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ACZ13030.1}; TaxID=525898 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" sourc
ar4r2_scaffold_1729_11
Sulfurovum sp. NBC37-1, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7756..9204)
DNA (1449bp) protein (483aa)
UPF0061 protein SUN_1621 n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QAR2_SULNB rbh
hypothetical protein
UPF0061 protein SUN_1621 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=387093 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. (strain NBC37-1).;"
ar4r2_scaffold_1729_12
CG_Epsilon_02, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

9299..9562
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. PN-3 RepID=U7I275_9GAMM
DNA/RNA helicase, superfamily II, SNF2 family Tax=CG_Epsilon_02
helicase domain-containing protein
ar4r2_scaffold_1729_13
RIFOXYB12_FULL_Sulfurimonas_35_9_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

9565..9858
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI00036AB0B8
hypothetical protein Tax=RIFOXYB12_FULL_Sulfurimonas_35_9_curated
ar4r2_scaffold_1729_14
CG_Epsilon_02, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

9962..10702
DNA (741bp) protein (247aa)
Tax=CG_Epsilon_02
ar4r2_scaffold_1729_15
CG_Epsilon_02, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

10715..12550
DNA (1836bp) protein (612aa)
adenine-specific DNA-methyltransferase; K07316 adenine-specific DNA-methyltransferase [EC:2.1.1.72] Tax=CG_Epsilon_02
mod2; type III restriction system methylase (EC:2.1.1.72)
Type III restriction-modification system StyLTI enzyme n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G7M5_9DELT rbh
ar4r2_scaffold_1729_16
Catenovulum agarivorans, Catenovulum, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12592..13581
DNA (990bp) protein (330aa)
Abi-like protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQT1_PUSST rbh
Abi family protein {ECO:0000313|EMBL:EWH09037.1}; TaxID=1328313 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Catenovulum.;" source="Catenovulum agarivoran
Abi family protein
ar4r2_scaffold_1729_17
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

13591..13686
DNA (96bp) protein (32aa)
Uncharacterized protein {ECO:0000313|EMBL:KIM03266.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
Displaying 17 items

View Taxonomy