ggKbase home page

ar4r2_scaffold_3768

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_3768_1
unknown

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)

This feature has no annotations

ar4r2_scaffold_3768_2
Pseudoalteromonas ruthenica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154..510
DNA (357bp) protein (119aa)
Dihydroneopterin aldolase {ECO:0000313|EMBL:KJY97856.1}; EC=4.1.2.25 {ECO:0000313|EMBL:KJY97856.1};; TaxID=151081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalterom
folB; dihydroneopterin aldolase (EC:4.1.2.25)
dihydroneopterin triphosphate 2''''-epimerase n=1 Tax=Pseudoalteromonas ruthenica RepID=UPI000345F307
ar4r2_scaffold_3768_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

507..1022
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000369D9B1
thioredoxin Tax=CG_Thiomicrospira_01
redoxin domain-containing protein
ar4r2_scaffold_3768_4
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1089..2321
DNA (1233bp) protein (411aa)
Histidine kinase, HAMP region: chemotaxis sensory transducer n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB04_9PROT
histidine kinase, HAMP region: chemotaxis sensory transducer
Histidine kinase, HAMP region: chemotaxis sensory transducer {ECO:0000313|EMBL:BAN34193.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulf
ar4r2_scaffold_3768_5
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2374..2943)
DNA (570bp) protein (190aa)
Nitroreductase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBL4_THICA
Nitroreductase {ECO:0000313|EMBL:KDN96048.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus
nitroreductase
ar4r2_scaffold_3768_6
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3210..4142
DNA (933bp) protein (311aa)
Putative permease n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SXI7_9GAMM
auxin efflux carrier
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44252.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
ar4r2_scaffold_3768_7
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4109..4630
DNA (522bp) protein (174aa)
Nlp family transcriptional regulator n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G5Q1_9GAMM
NlpC/P60 family protein 2
NlpC/P60 family protein 2 {ECO:0000313|EMBL:AHK78876.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodo
ar4r2_scaffold_3768_8
Halomonas sp. SUBG004, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4655..5344
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Halomonas jeotgali RepID=UPI00034C5D13
ABC transporter {ECO:0000313|EMBL:KFC50920.1}; TaxID=1485007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. SUBG004.;"
vacJ; putative lipoprotein VacJ
ar4r2_scaffold_3768_9
Gallaecimonas xiamenensis, Gallaecimonas, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5393..5824
DNA (432bp) protein (144aa)
Exodeoxyribonuclease III n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2J7A6_9GAMM
Exodeoxyribonuclease III {ECO:0000313|EMBL:EKE70988.1}; TaxID=745411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Gallaecimonas.;" source="Gallaecimonas xiamenensis 3-C-1.;"
exonuclease III
ar4r2_scaffold_3768_10
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5842..6219
DNA (378bp) protein (126aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III {ECO:0000313|EMBL:ADZ91182.1}; EC=3.1.11.2 {ECO:0000313|EMBL:ADZ91182.1};; TaxID=717774 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.
Exodeoxyribonuclease III n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2K2P9_MARM1
ar4r2_scaffold_3768_11
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6216..6899
DNA (684bp) protein (228aa)
fre; FMN reductase (EC:1.-.-.-)
LuxG n=1 Tax=Aliivibrio logei RepID=G0XZS8_ALILO
Uncharacterized protein {ECO:0000313|EMBL:KDN96199.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibri
ar4r2_scaffold_3768_12
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6911..7114
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003663E1C
cbb3-type cytochrome oxidase maturation protein Tax=CG_Thiomicrospira_01
cytochrome oxidase maturation protein, cbb3-type
ar4r2_scaffold_3768_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7068..7589)
DNA (522bp) protein (174aa)
arylesterase (EC:3.1.1.2); K10804 acyl-CoA thioesterase I [EC:3.1.2.- 3.1.1.5] Tax=CG_Thiomicrospira_01
arylesterase (EC:3.1.1.2)
Lipase/acylhydrolase domain protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I78_THICR
ar4r2_scaffold_3768_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7680..8345
DNA (666bp) protein (222aa)
ATP-binding cassette (ABC) superfamily transporter, ATP-binding component n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I77_THICR
ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=CG_Thiomicrospira_01
ABC transporter
ar4r2_scaffold_3768_15
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8342..10789
DNA (2448bp) protein (816aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7F9_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF00988.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkal
ar4r2_scaffold_3768_16
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10870..11100
DNA (231bp) protein (77aa)
SpoVT/AbrB domain protein n=4 Tax=root RepID=B5EMW1_ACIF5
SpoVT/AbrB domain-containing protein
Virulence protein, putative {ECO:0000313|EMBL:ACK78654.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="
ar4r2_scaffold_3768_17
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11100..11504
DNA (405bp) protein (135aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NXJ7_AROAE
virulence associated protein VapC
ar4r2_scaffold_3768_18
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11576..11866
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00036064DB
vapI; plasmid maintenance system antidote protein VapI
Putative plasmid maintenance system antidote protein VapI-containing a helix-turn-helix motif {ECO:0000313|EMBL:CAI07551.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyc
ar4r2_scaffold_3768_19
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11937..12452)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003810F54
type I restriction-modification system methyltransferase subunit
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:BAP54806.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiop
Displaying 19 items

View Taxonomy