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ar4r2_scaffold_1015

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1015_1
Methylophaga aminisulfidivorans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86..688
DNA (603bp) protein (201aa)
Cob(I)alamin adenosyltransferase (EC:2.5.1.17)
ATP:corrinoid adenosyltransferase n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5T021_9GAMM
ATP:corrinoid adenosyltransferase {ECO:0000313|EMBL:EGL54857.1}; TaxID=1026882 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methy
ar4r2_scaffold_1015_2
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

741..1316
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GI85_NITSI
hypothetical protein
Tax=BJP_S1_SUB10_Methylophilales_55_32
ar4r2_scaffold_1015_3
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1316..2602
DNA (1287bp) protein (429aa)
CobB/CobQ domain-containing protein glutamine amidotransferase; K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] Tax=RBG_16_Gamma2_64_11_curated
Cobyrinic acid A,C-diamide synthase n=1 Tax=Pseudomonas sp. GM55 RepID=J2T5X4_9PSED rbh
cobyrinic acid a,c-diamide synthase
ar4r2_scaffold_1015_4
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2624..3706
DNA (1083bp) protein (361aa)
Heat shock protein DnaJ domain-containing protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFX5_NITSI
molecular chaperone DnaJ
Heat shock protein DnaJ domain-containing protein {ECO:0000313|EMBL:AEJ00085.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;
ar4r2_scaffold_1015_5
Marinomonas profundimaris, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3747..4664
DNA (918bp) protein (306aa)
UPI0003D5D5CE related cluster n=1 Tax=unknown RepID=UPI0003D5D5CE
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1208321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas profu
cobalamin biosynthesis protein CobD
ar4r2_scaffold_1015_6
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4661..5647
DNA (987bp) protein (329aa)
Threonine-phosphate decarboxylase {ECO:0000313|EMBL:KIN89459.1}; EC=4.1.1.81 {ECO:0000313|EMBL:KIN89459.1};; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocy
L-threonine-O-3-phosphate decarboxylase n=2 Tax=Thauera RepID=C4KCD4_THASP
L-threonine-O-3-phosphate decarboxylase
ar4r2_scaffold_1015_7
unknown

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comp(5694..6068)
DNA (375bp) protein (125aa)

This feature has no annotations

ar4r2_scaffold_1015_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6114..6653)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9L7_9GAMM
hypothetical protein; K09860 hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
ar4r2_scaffold_1015_9
unknown

Not on your lists

comp(6763..7929)
DNA (1167bp) protein (389aa)

This feature has no annotations

ar4r2_scaffold_1015_10
unknown

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comp(8016..9161)
DNA (1146bp) protein (382aa)

This feature has no annotations

ar4r2_scaffold_1015_11
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9142..11778)
DNA (2637bp) protein (879aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037D0A26
pepN; aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:ACL71806.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio
ar4r2_scaffold_1015_12
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11889..12356)
DNA (468bp) protein (156aa)
Peptidoglycan-associated lipoprotein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BZE6_9GAMM
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:BAN69537.1}; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Mon
OmpA/MotB protein
ar4r2_scaffold_1015_trna_1
unknown

Not on your lists

comp(12506..12578)
DNA (73bp)
transferRNA
ar4r2_scaffold_1015_13
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12640..13335)
DNA (696bp) protein (232aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase n=1 Tax=Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221) RepID=F8H6G8_PSEUT
exsB; ExsB protein
ar4r2_scaffold_1015_14
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13518..14258)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7Z8E0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT68069.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
TPR domain-containing protein
ar4r2_scaffold_1015_15
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14287..14835)
DNA (549bp) protein (183aa)
OmpA/MotB domain protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D825_9GAMM
flagellar motor protein MotB
Flagellar motor protein MotB {ECO:0000313|EMBL:AHF01039.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thio
ar4r2_scaffold_1015_16
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14900..16237)
DNA (1338bp) protein (446aa)
Protein TolB n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=TOLB_THICR rbh
TolB-like
Protein TolB {ECO:0000255|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Th
ar4r2_scaffold_1015_17
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16249..17334)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036E1D0E
cell envelope protein TolA
Cell envelope protein TolA {ECO:0000313|EMBL:AHF01037.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioal
ar4r2_scaffold_1015_18
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17338..17838)
DNA (501bp) protein (167aa)
TolR protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31H81_THICR
biopolymer transport protein ExbD/TolR
TolR protein {ECO:0000313|EMBL:ABB41492.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena
ar4r2_scaffold_1015_19
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17839..18540)
DNA (702bp) protein (234aa)
TolQ protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q609K7_METCA
tolQ; membrane spanning protein in TolA-TolQ-TolR complex
MotA/TolQ/ExbB proton channel; K03562 biopolymer transport protein TolQ Tax=CG_Thiomicrospira_01
ar4r2_scaffold_1015_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18537..18947)
DNA (411bp) protein (137aa)
4-hydroxybenzoyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Thiobacillus thioparus RepID=UPI00037339BA
thioesterase
ar4r2_scaffold_1015_21
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18944..19957)
DNA (1014bp) protein (338aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D830_9GAMM
ar4r2_scaffold_1015_22
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19954..20565)
DNA (612bp) protein (204aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction DNA helicase RuvA n=1 Tax=Dickeya zeae RepID=UPI0003703517
Holliday junction DNA helicase RuvA
ar4r2_scaffold_1015_23
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20596..21057)
DNA (462bp) protein (154aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Holliday junction resolvase n=1 Tax=Thiomicrospira arctica RepID=UPI000379B15F
crossover junction endodeoxyribonuclease RuvC
ar4r2_scaffold_1015_24
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21059..21805)
DNA (747bp) protein (249aa)
Probable transcriptional regulatory protein Thicy_1024 n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8E0_THICA rbh
hypothetical protein
Probable transcriptional regulatory protein Thicy_1024 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioa
ar4r2_scaffold_1015_25
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21819..22910)
DNA (1092bp) protein (364aa)
quinolinate synthetase; K03517 quinolinate synthase [EC:2.5.1.72] Tax=CG_Thiomicrospira_01
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003800CF7
quinolinate synthetase
ar4r2_scaffold_1015_26
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22953..23339)
DNA (387bp) protein (129aa)
PilT protein domain protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DC33_9GAMM
twitching motility protein PilT
Twitching motility protein PilT {ECO:0000313|EMBL:AHF01743.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="T
ar4r2_scaffold_1015_27
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23336..23581)
DNA (246bp) protein (82aa)
Prevent-host-death family protein n=3 Tax=Acidithiobacillus RepID=B5EMF2_ACIF5
prevent-host-death family protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
prevent host death protein
ar4r2_scaffold_1015_28
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23718..25502)
DNA (1785bp) protein (595aa)
Aspartate--tRNA ligase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D835_9GAMM rbh
aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AHF01029.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalka
ar4r2_scaffold_1015_29
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25506..26153)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036F87F6
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Displaying items 1-30 of 43 in total

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