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ar4r2_scaffold_1556

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1556_1
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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38..781
DNA (744bp) protein (248aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000255|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000255|HAMAP-Rule:MF_01014};; Phosphoribosylform
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=HIS4_THICR
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
ar4r2_scaffold_1556_2
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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781..1539
DNA (759bp) protein (253aa)
imidazole glycerol phosphate synthase subunit HisF (EC:5.3.1.16)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
imidazole glycerol phosphate synthase n=1 Tax=Methylobacter marinus RepID=UPI00035C4153 rbh
ar4r2_scaffold_1556_3
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1600..2922)
DNA (1323bp) protein (441aa)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B510_9PROT
rimO; hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
ar4r2_scaffold_1556_4
Buttiauxella agrestis, Buttiauxella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2973..3362)
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC78559.1}; TaxID=1006004 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Buttiauxella.;" source="Buttiauxella
ar4r2_scaffold_1556_5
Nitrincola sp. A-D6, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3359..3874)
DNA (516bp) protein (172aa)
chemotaxis protein n=1 Tax=Pseudomonas caeni RepID=UPI0003B3B153
Uncharacterized protein {ECO:0000313|EMBL:KGK42412.1}; TaxID=1545442 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. A-D6.;"
putative chemotaxis protein CheW
ar4r2_scaffold_1556_6
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3871..5583)
DNA (1713bp) protein (571aa)
Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVP8_9PROT
response regulator containing a CheY-like receiver domain and a GGDEF domain
Response regulator containing a CheY-like receiver domain and a GGDEF domain {ECO:0000313|EMBL:CAM74705.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodos
ar4r2_scaffold_1556_7
Nitrincola sp. A-D6, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5586..5954)
DNA (369bp) protein (123aa)
response regulator n=1 Tax=Pseudomonas caeni RepID=UPI0003B55B0C
Response regulator {ECO:0000313|EMBL:KGK42413.1}; TaxID=1545442 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. A-D6.;"
Response regulator receiver protein
ar4r2_scaffold_1556_8
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5979..8144)
DNA (2166bp) protein (722aa)
Gliding motility regulatory protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W2W7_MAGSA
gliding motility regulatory protein
Gliding motility regulatory protein {ECO:0000313|EMBL:BAE51808.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source=
ar4r2_scaffold_1556_9
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8134..9561)
DNA (1428bp) protein (476aa)
putative Protein methyltransferase frzF (EC:2.1.1.80)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6E5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00942.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
ar4r2_scaffold_1556_10
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9570..10607)
DNA (1038bp) protein (346aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=765914 species="Bacteria; Proteobacteria; Gammap
response regulator receiver modulated CheB methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E2D5_9GAMM
ar4r2_scaffold_1556_11
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10604..12556)
DNA (1953bp) protein (651aa)
Putative Methyl-accepting chemotaxis sensory transducer n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F672_9PROT
putative Methyl-accepting chemotaxis sensory transducer
Putative Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:CDL00944.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnet
ar4r2_scaffold_1556_12
unknown

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comp(12706..13320)
DNA (615bp) protein (205aa)

This feature has no annotations

ar4r2_scaffold_1556_13
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13329..14438)
DNA (1110bp) protein (370aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000255|HAMAP-Rule:MF_00110}; EC=4.2.3.4 {ECO:0000255|HAMAP-Rule:MF_00110};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Pisciric
3-dehydroquinate synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=AROB_THICR rbh
ar4r2_scaffold_1556_14
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14438..14989)
DNA (552bp) protein (184aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1206777 species="Bacteria; Proteobacteria; Gammap
Shikimate kinase n=1 Tax=Pseudomonas sp. Lz4W RepID=M5R3C0_9PSED
aroK; Shikimate kinase
Displaying 14 items

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