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ar4r2_scaffold_990

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_990_trna_1
unknown

Not on your lists

comp(15..87)
DNA (73bp)
transferRNA
ar4r2_scaffold_990_1
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126..728)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5B8_9GAMM
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_990_2
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(725..2101)
DNA (1377bp) protein (459aa)
Protoporphyrinogen oxidase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNJ2_9GAMM
Protoporphyrinogen oxidase {ECO:0000313|EMBL:KFZ89894.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
protoporphyrinogen oxidase
ar4r2_scaffold_990_3
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2098..4140)
DNA (2043bp) protein (681aa)
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=317025 species="Bacteria
DNA ligase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=DNLJ_THICR rbh
ar4r2_scaffold_990_4
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4159..5031)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000381A298
Cell division protein ZipA {ECO:0000256|RuleBase:RU003612}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogeno
cell division protein-like protein
ar4r2_scaffold_990_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5226..6527
DNA (1302bp) protein (434aa)
carbohydrate kinase (EC:2.7.1.-)
Carbohydrate kinase, FGGY n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPG5_9GAMM
Carbohydrate kinase, FGGY {ECO:0000313|EMBL:EIJ33258.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 52
ar4r2_scaffold_990_6
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6495..7253)
DNA (759bp) protein (253aa)
CbbY n=1 Tax=Thiobacillus denitrificans RepID=UPI0003636217
CbbY {ECO:0000313|EMBL:KGF71584.1}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy1.;"
HAD family hydrolase
ar4r2_scaffold_990_7
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7394..7825
DNA (432bp) protein (144aa)
molecular chaperone DnaK n=1 Tax=Thiomicrospira halophila RepID=UPI000360E0B9
TraR/DksA family transcriptional regulator
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovib
ar4r2_scaffold_990_8
Candidatus Methylopumilus turicensis, Candidatus Methylopumilus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7831..8727
DNA (897bp) protein (299aa)
gluQ; Glutamyl-Q tRNA(Asp) synthetase (EC:6.1.1.-)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0
hypothetical protein n=1 Tax=Methylotenera RepID=UPI0003661AA8
ar4r2_scaffold_990_9
Candidatus Methylopumilus planktonicus, Candidatus Methylopumilus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8742..9104)
DNA (363bp) protein (121aa)
Nitrogen regulatory protein P-II n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H412_METFK
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:CEZ20247.1}; TaxID=1581557 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacte
nitrogen regulatory protein P-II (GlnB, GlnK)
ar4r2_scaffold_990_10
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9120..12224)
DNA (3105bp) protein (1035aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X9U4_METSD rbh
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ACT51485.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methy
CzcA family heavy metal efflux pump
ar4r2_scaffold_990_11
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12229..13389)
DNA (1161bp) protein (387aa)
Secretion protein HlyD n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JC7_DECAR
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB Tax=GWA2_Gallionellales_54_124_curated
secretion protein HlyD
ar4r2_scaffold_990_12
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13394..14581)
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000372BA0B
outer membrane efflux protein Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
outer membrane efflux protein
ar4r2_scaffold_990_13
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14634..16076)
DNA (1443bp) protein (481aa)
deoxyribodipyrimidine photo-lyase (EC:4.1.99.3)
Deoxyribodipyrimidine photo-lyase n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X7F3_METSD
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KIA80220.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromob
ar4r2_scaffold_990_14
Eikenella corrodens, Eikenella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16151..16393)
DNA (243bp) protein (81aa)
Cell division topological specificity factor n=2 Tax=Eikenella corrodens RepID=C0DZ53_EIKCO
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=546274 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisser
minE; cell division topological specificity factor MinE
ar4r2_scaffold_990_15
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16409..17218)
DNA (810bp) protein (270aa)
cell division inhibitor MinD n=1 Tax=Leucothrix mucor RepID=UPI0003B6AA0D
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovi
septum site-determining protein MinD
ar4r2_scaffold_990_16
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17252..18025)
DNA (774bp) protein (258aa)
Probable septum site-determining protein MinC n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8K0_THICA
septum site-determining protein minC
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicr
ar4r2_scaffold_990_17
Actinobacillus ureae, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18234..18815)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Haemophilus sputorum RepID=UPI000248AF2C
M22-like peptidase
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EFX91734.1}; TaxID=887324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinoba
ar4r2_scaffold_990_18
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18920..20842)
DNA (1923bp) protein (641aa)
Helicase c2 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7X6_9GAMM
helicase
Helicase {ECO:0000313|EMBL:AHF01085.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aero
Displaying 19 items

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