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ar4r2_scaffold_605_13

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49

near complete RP 41 / 55 MC: 3 BSCG 46 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(10675..14112)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1206777 species="Bacteria; P similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 999.99
  • Bit_score: 1177
  • Evalue 0.0
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000370D935 similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 999.99
  • Bit_score: 1178
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 999.99
  • Bit_score: 1174
  • Evalue 0.0

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Taxonomy

Pseudomonas sp. Lz4W → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3438
GTGATTTTTAGCCTACCCTCTTGGAATCAACAACAACACAAAACCCTCTTTTGGTCTGGTTTGGGCGATGCAGGGATTGCGCTAGCTTTAAGCCAGCTAGAAGAATCTTATAGCAAACCATTGCTTGTGGTAACGGAAACAGCCCAACAGGCACAACAATTGGCACTAGAGTTAAACTTTTTTAGTCCGCAAAGTTGTTTGCTCTTTCCGGATTGGGAAACCCTACCTTACGATCGTTTTTCTCCGCATCAAGACATCATTTCGGCTAGGCTTCAAGCCCTCTATCGTCAAGCCACTACGCCCCCTCGCTTCTTAATCGCTCAAGTTTCTACCTTAATGCATCAGCTGATTCCAGCAGATTATCTGTTGAGTCGCAGTTTCGTATTGTCGGTTGGTCAACTGATTGACCGTCATGACTTTACTCGAAACTTAGAAAGCAATGGTTATCAGCGTGTTGCCCAAGTTATGGAGCATGGCGAATATGCACTGCGTGGTGCCTTGCTGGATGTCTTTCCGATGGGGGGAGACCAGCCATTACGTATTGATTGGCTTGATGATGAAATTGACTCTATCCGTCAGTTTGATGTTAGCACACAACTCACGACACAAAAAATTGATGCCATTACCCTATTGCCCGCTAAAGAATATCCCTTAGATAATGACAGCATTCATCAATTTCGCCAACAATGGCGCGATGCCTTTCCCGATGCCAATACCCGCACCAACTGGCTTTACCAAGCGGTTTCTAAAGGACAAAGTTCCAGCGGGTTGGAATATTACCTTGCCTTGTTTTTTGATCAACTCAGTGCCATTACCGACTACCTAACTCAAGAAACACACATCGTTTGGGTGGGTAAAGTCGCACCCGCTGCTGAAGCTTTTTACCGTGATGTTGAAGAGCGTTACACCATTGGTAAGCTCGATCCCAATCACCCTCTATTGCCGCCAGACCGCGTGTTCTTAGCAGCAAATGATTGGCTGGCTCGCATGAAGCCTTTCTATCGCATTGAATTATCTGCTGACGTAAGGCACGACAATAGCCAGCATTGGAATCTTAAACCCCTTCCTGATTTAAGTATCGACCCTAGTCGTCCCGATGCACTATGGCGCCTAGCCGATTGGCTCCCCAGCTTAAGCAGCCAAACCAAAGTATTACTGGTAGCCGAGTCAGTAGGTCGCCGTGAAGTGCTGATTGAGCTATTGCAAAAATCTCGTCTAAAAGTCATGCGTGCCGAGCATTGGTCAGATTTTTTGCGGGCAGAAAACCCTGGTCTGTATTTAACGGTAGCGCCACTCAGTCACAACCTCTGGCTAGACGACATCGTCATTATTAGTGAGGTTTCCTTGTATGGCACGCAAGTGCGTCAGACTCGACGTCGCAAACGCAGTGCACATCAAGATTTTACCGACGGTATTCGTTCGCTTGCCGAATTGGATATCGGCTCTGCCGTAGTGCATCTCGAACATGGTGTTGGTCGATACATGGGATTAGAAACCCTGACCCTAGGCGATATTCCGCGTGAATTCGTCGCCCTAGAGTATGCGGGTGGCGACAAACTTTATGTTCCCATTACCAATTTACACTTAATAAGCCGTTATGCGGGCGCTGATGCCGACCATGCCCCTTGGCATAAACTGGGCAATGATCGCTGGAGCAAAGCGCGTAAACAAGCCATTGAAAAAGTCCGTGATGTCGCTGCCGAGTTGCTCGATTTATACGCCGCTCGAGAAGCCCGACGCGGTCATGCTTTTGCCGATGCAGGCGCTGATTACCTGCGCTTTAGTGCCGGCTTTGCCTTTGAAACCACGCCAGACCAACAAAACGCCATTGATGCCGTAATTGCCGATATGCAATCTCCTCGCCCAATGGATCGCTTAGTCTGTGGTGATGTGGGTTTTGGTAAAACCGAAGTGGCAATGCGCGCTGCCTTTATGGCGGTGCATGGTGGTAAGCAAGTGGTGGTATTGGTGCCAACCACCCTGTTAGCGAATCAGCATTTACAAAACTTCCGCGACCGCTTTGCCGACTGGCCAGTCAAAATCGAGGCGCTTTCACGCTTTGGCGGCTCAACGAATCAAGCCAAGGTCATTGAACAGATTGCCGAAGGTAAAGTGGATATCGTTATTGGTACTCATAAGCTATTACAAAGTGATATGCGTTATCACGATCTTGGTTTAATTATCATCGATGAAGAACACCGCTTTGGCGTTAAACAAAAAGAATTCCTAAAAAGTCTGCGCACTCAAGTCGATATTCTTGCCATGACCGCCACCCCGATTCCACGCACGCTATCCATGGCATTTGCACAACTGCGGGATATGTCGATTATCGCTACCCCACCAGCGAAGCGTCAGTCGATTCAAACTTTTGTGCAAGATTGGAATCCTGAGTTAGCGAAAGAAGCTTGCACTCGTGAGTTGCGTCGTGGTGGACAGGTGTATGTGTTGTTCAACGATGTGGAACGTATGCCTGCATTTGTTGAAGAACTGAGTCAATTAATGCCCGATGCGCGCATTGCTATGGCGCATGGACAAATGCCAGAACGTGAATTAGAGCGCGTGATGCGTGATTTTTATCATCAAAACTACAATATTTTGGTCTCCACCACCATTATCGAAACCGGTATTGATATTCCCAATGCCAATACCATTTTGATTCACCGCGCCGATAAATTTGGTTTAGCCCAGCTTCACCAATTGAGAGGACGTGTGGGTCGCTCACACCACAAAGCCTACGCTTATCTATTCACCCCACCTAAAGAAGCGCTGAGCGCTGATGCGGTGAAACGCCTAGAAGCTATTGCCCGCCACGATCAGTTGGGTTCTGGCTTTGCCCTCGCCAGTCAAGATTTAGAAATCCGTGGTGCCGGTGAGCTGCTCGGTCATGAGCAAAGTGGACAGATGCAAGAGATTGGTTTTGAACTCTATACCCAGCTGCTCGATAAAGCGGTTCGCGCCTACCGTCGTGGCGAAGTTCCTAACTTAGAAGATAACAGTGAACAGTGTGAAGTCGATTTAGCCATCCCTGCTCTCATTCCCGACGATTATTTACCCGATATTTCAGCGCGCCTAGTACTGTACAAGCGCATTAATGCCGCCGAAGATCAAAATGGGCTTCATCAATTACAAGTCGAGATGGTCAATCGTTTTGGATTACTGCCCGATGCTTGTAAAAATCTGTTCGCCATTATGCAGCTCAAACAACAAGCACTCGCGTTGGGTATTCATAAAATCGAAGCTAATGCCAACCAAATTAAACTTCATTTCTTGACCAAAACGCGCGTAGAACCGATCAAACTGATCCAACTCATTCAACAACAGCCAAAAATTTATAAACTGGATGGACCAAACAAGTTAAAATGGCTGGGAAATATCACTGAAGCGACGCAACGACTCACGGCAGTAGAAAATTTACTTACTCAACTTTCCCCTTCTTAA
PROTEIN sequence
Length: 1146
VIFSLPSWNQQQHKTLFWSGLGDAGIALALSQLEESYSKPLLVVTETAQQAQQLALELNFFSPQSCLLFPDWETLPYDRFSPHQDIISARLQALYRQATTPPRFLIAQVSTLMHQLIPADYLLSRSFVLSVGQLIDRHDFTRNLESNGYQRVAQVMEHGEYALRGALLDVFPMGGDQPLRIDWLDDEIDSIRQFDVSTQLTTQKIDAITLLPAKEYPLDNDSIHQFRQQWRDAFPDANTRTNWLYQAVSKGQSSSGLEYYLALFFDQLSAITDYLTQETHIVWVGKVAPAAEAFYRDVEERYTIGKLDPNHPLLPPDRVFLAANDWLARMKPFYRIELSADVRHDNSQHWNLKPLPDLSIDPSRPDALWRLADWLPSLSSQTKVLLVAESVGRREVLIELLQKSRLKVMRAEHWSDFLRAENPGLYLTVAPLSHNLWLDDIVIISEVSLYGTQVRQTRRRKRSAHQDFTDGIRSLAELDIGSAVVHLEHGVGRYMGLETLTLGDIPREFVALEYAGGDKLYVPITNLHLISRYAGADADHAPWHKLGNDRWSKARKQAIEKVRDVAAELLDLYAAREARRGHAFADAGADYLRFSAGFAFETTPDQQNAIDAVIADMQSPRPMDRLVCGDVGFGKTEVAMRAAFMAVHGGKQVVVLVPTTLLANQHLQNFRDRFADWPVKIEALSRFGGSTNQAKVIEQIAEGKVDIVIGTHKLLQSDMRYHDLGLIIIDEEHRFGVKQKEFLKSLRTQVDILAMTATPIPRTLSMAFAQLRDMSIIATPPAKRQSIQTFVQDWNPELAKEACTRELRRGGQVYVLFNDVERMPAFVEELSQLMPDARIAMAHGQMPERELERVMRDFYHQNYNILVSTTIIETGIDIPNANTILIHRADKFGLAQLHQLRGRVGRSHHKAYAYLFTPPKEALSADAVKRLEAIARHDQLGSGFALASQDLEIRGAGELLGHEQSGQMQEIGFELYTQLLDKAVRAYRRGEVPNLEDNSEQCEVDLAIPALIPDDYLPDISARLVLYKRINAAEDQNGLHQLQVEMVNRFGLLPDACKNLFAIMQLKQQALALGIHKIEANANQIKLHFLTKTRVEPIKLIQLIQQQPKIYKLDGPNKLKWLGNITEATQRLTAVENLLTQLSPS*