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ar4r2_scaffold_1243

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1243_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..275
DNA (273bp) protein (91aa)
Transcriptional regulator, LysR family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BR07_9GAMM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EIJ33800.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix
LysR family transcriptional regulator
ar4r2_scaffold_1243_2
unknown

Not on your lists

comp(220..1278)
DNA (1059bp) protein (353aa)
hypothetical protein
ar4r2_scaffold_1243_3
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1272..1985)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003640758
hypothetical protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44936.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
ar4r2_scaffold_1243_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1975..2973)
DNA (999bp) protein (333aa)
von Willebrand factor A; K07114 uncharacterized protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
von Willebrand factor type A id=1345668 bin=GWE1_T_denit_62_9 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
ar4r2_scaffold_1243_5
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2970..3953)
DNA (984bp) protein (328aa)
von Willebrand factor type A domain-containing protein n=1 Tax=Pseudomonas sp. Chol1 RepID=K5XAA5_9PSED
conserved hypothetical protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44937.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
ar4r2_scaffold_1243_6
unknown

Not on your lists

comp(3950..4321)
DNA (372bp) protein (124aa)

This feature has no annotations

ar4r2_scaffold_1243_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4325..5683)
DNA (1359bp) protein (453aa)
Amine oxidase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZQ3_9GAMM rbh
Amine oxidase {ECO:0000313|EMBL:EIJ36846.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea
hypothetical protein rbh
ar4r2_scaffold_1243_8
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5692..6792)
DNA (1101bp) protein (367aa)
Agmatine deiminase (EC:3.5.3.12)
Agmatine deiminase {ECO:0000313|EMBL:ADZ90970.1}; EC=3.5.3.12 {ECO:0000313|EMBL:ADZ90970.1};; Flags: Precursor;; TaxID=717774 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
Agmatine deiminase n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2K0I6_MARM1 rbh
ar4r2_scaffold_1243_9
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6813..7256)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Ochrobactrum anthropi RepID=UPI000289C765
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXL04128.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
ar4r2_scaffold_1243_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7294..8202)
DNA (909bp) protein (303aa)
Putative uncharacterized protein id=1347990 bin=GWE1_T_denit_62_9 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
ar4r2_scaffold_1243_11
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8199..9449)
DNA (1251bp) protein (417aa)
HipA N-terminal domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SNB0_9DELT
HipA N-terminal domain protein {ECO:0000313|EMBL:EFI34236.1}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" source
protein HipA
ar4r2_scaffold_1243_12
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9452..9712)
DNA (261bp) protein (87aa)
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABS63775.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lava
ar4r2_scaffold_1243_13
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9861..10190)
DNA (330bp) protein (110aa)
mRNA interferase n=1 Tax=uncultured bacterium RepID=K1YKG2_9BACT
MazF family transcriptional regulator
Tax=BJP_IG2158_Nitrospirales_45_240
ar4r2_scaffold_1243_14
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10187..10420)
DNA (234bp) protein (78aa)
Putative transcriptional regulator, CopG family n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1M3_DESAT
CopG family transcriptional regulator Tax=GWC2_Syntrophus_56_31_curated
CopG family transcriptional regulator
ar4r2_scaffold_1243_15
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10463..11425)
DNA (963bp) protein (321aa)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9A2_9GAMM rbh
MoxR-like ATPase
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44940.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
ar4r2_scaffold_1243_16
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11429..12667)
DNA (1239bp) protein (413aa)
Major facilitator superfamily (MFS) transporter n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JI3_THICR
major facilitator transporter
Major facilitator superfamily (MFS) transporter {ECO:0000313|EMBL:ABB40690.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;
ar4r2_scaffold_1243_17
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12787..15000)
DNA (2214bp) protein (738aa)
cation transport ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00035C7CCC rbh
copA; copper-exporting P-type ATPase A
ar4r2_scaffold_1243_18
GWF2_Sulfurimonas_37_8_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15051..15662)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Sulfurovum sp. AR RepID=I2K8H7_9PROT
hypothetical protein Tax=GWF2_Sulfurimonas_37_8_curated
hypothetical protein
ar4r2_scaffold_1243_19
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15729..16058)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXF8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ36051.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
ar4r2_scaffold_1243_20
unknown

Not on your lists

16191..16466
DNA (276bp) protein (92aa)

This feature has no annotations

ar4r2_scaffold_1243_21
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16482..17147
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037AE5F8
Rhodanese-like protein {ECO:0000313|EMBL:EPJ46601.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbion
arsR family transcriptional regulator
ar4r2_scaffold_1243_22
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17175..17909
DNA (735bp) protein (245aa)
beta-lactamase n=1 Tax=Thiomicrospira arctica RepID=UPI0003666C4A rbh
Beta-lactamase-like
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:ABB40689.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" sou
ar4r2_scaffold_1243_23
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18020..18457
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SMJ8_THIDA
hypothetical protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
hypothetical protein
ar4r2_scaffold_1243_24
unknown

Not on your lists

18665..18904
DNA (240bp) protein (80aa)

This feature has no annotations

ar4r2_scaffold_1243_25
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18952..21840)
DNA (2889bp) protein (963aa)
Ankyrin n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNW0_9GAMM
Ankyrin {ECO:0000313|EMBL:EIJ33053.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ankyrin
ar4r2_scaffold_1243_26
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22005..23564
DNA (1560bp) protein (520aa)
UPF0061 protein Thini_4250 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZE4_9GAMM rbh
UPF0061 protein Thini_4250 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea D
hypothetical protein
ar4r2_scaffold_1243_27
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23567..24313)
DNA (747bp) protein (249aa)
Spermine synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BP58_9GAMM
Spermine synthase {ECO:0000313|EMBL:EIJ33151.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
spermine synthase
Displaying 27 items

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